Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00009 ATGTGTAGGATATCCCTCATGGTGACTGGTTTTGCCCTTCATGTTGTTGTGCGATTTGCAGCCAAATCAAAACAGAAGGGACTGAGGATGTACTTTTTCTTACTTGCATTCAATGTGAACATAAATATATATGCAGGCCTCCAAAGCCTATTAGGAAAGCCACTTACAGTGGGTCCGAACAATCTAACTTGGACCTTGGAGAAGTTTAACAACTCTGAGAGTCCTGATGTTGGCAGTTCTCAGAATTACTTATTGGCAGAGAAATACAACAAACTCAGTGTTGCACTTTCGGTGAGGCATGAGTGTTTTGATCCCCTGAAGAACCCTTTGACTGGTAGAGATATCATTGATGATGTTATTTTCAACTCAAGGTCAAAGCTCAATCGATTGAATTATAAACCCTGTACTTCTGGAGCAAAATGA 423 0.4043 MCRISLMVTGFALHVVVRFAAKSKQKGLRMYFFLLAFNVNINIYAGLQSLLGKPLTVGPNNLTWTLEKFNNSESPDVGSSQNYLLAEKYNKLSVALSVRHECFDPLKNPLTGRDIIDDVIFNSRSKLNRLNYKPCTSGAK* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00009 140 PANTHER PHD FINGER PROTEIN 12 42 133 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00009 Lapu-Chr1 1194549 1196396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00009 42 132 PHD Transcription Factor Family AT5G58610 41.758 1.90e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00009 - - pvu:PHAVU_008G260100g 166.007