LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g01806	ATGAGGCCTAACCTACACAAACTGCTTGTTTTCATGTACTGGTGGTTGTGGTGGACTACTTCTGTTCATGTTGAAGCAGCAGATCACAGTTTAAAGCCCGGTGACACACTGAATTTCTCTTCTCCACTACTATATTCTAAGAATGGAAAATATTTTCTAGATTTTTATCCGACTGGAAGAGCGACGGAAAGATTCACTTACTTGGTAATCCATAGTATACATGGCAATCAGATAGTTTGGAATGGTAATAGGGAACAATCTGTGGACCAGAGTGATGCAGTTCTATCCCTAAACTTCTCTGGCGTGCTGAAAATAGAATCTGGCTCTGTGAAAAAACCAATTATTCTCTATTCTCCTCCTCAGCCTATCAACAACACTATAGCCACTTTGTTGGACACAGGCAACTTCGTGCTTCAACACCTTGACCCCAATGGGACAAACATTCTCTTGTGGCAGAGTTTTGATTATCCCACTGACACTTTGATCCCCACCATGAAGTTAGGTGTTAATCACAAAACAGGCCATCATTGGCTACTTGTTTCACAGTTGACCGATGTGCGCGCCACTCCAGGTACCTTTCGTCTCGAATGGGAACCAACAACACGAGAACTAATCATAAAGAGAAGAGGAAAAGTTTGTTGGCGAAGTGGGAAACTGAGGAACAATAGATTTGAGCACATTCCGGAAGATGCACAGCGCGTGTTGAACTACACCATAGTGTCTAATGGTGATGAAGACTCCTTCTCTTTCACATCTACAAATGAAAACCATACACACTGGTGGTCCCTATCGGATACTGGACGCTTATCTTACAATTTCAATGAAGGATATGTTGCGAGGGCTGATTTGTGCTATGGATATAACAGCACTGGAGGGTGCCAACTATGGCAGGATATACCTAAGTGCAGGAATCCTGGTGATGTGTTTGACAAAAAGAGTCTTCAACCCAATTATGAAAATGAAACCGTTGATGAAAATGATAATATTAATCACAGTGATTGTGAGGCTGCTTGCTGGAGCGACTGTAATTGCAATGGATTCACAGAACACTATCTTAGTGGAACTGGATGTAGATTCTACCATTGGAATTCATCGAAAGATTATATAGTTGACGGTACTGTTTCGGGTCAAGACTTTTACATACTGGAGAACAAAGGGATCATAATCCAGCATCACCAAGGTAGAAAAAGGTGGGTGTGGATAAGTCCAGTAATAGCAGCTACTTTACTAATAATATGCGTATCCATTGTATTCCTAGCCATAAAGAAACGACAACATGTGCATCAAGAGATGAAACAGAAAGAAATGGCGATGCAAAATTCAGCAACTGCTGATGGATTATCTCTGATGGAAGATTTTGGAAATGATTTGAAAAAGGGACACGGTTTAAAAGTATTCGATTATACATTGGTTGTGGCGGCCACAAATGGGTTTTCATTTGAAAATAAGTTAGGACAGGGAGGTTTTGGACCAGTTTATAAGGGAACTTTGCACACAGGAGAGGAGGTTGCTATAAAAAGACTTTCAAGAAGCTCTGCACAAGGAATTGTAGAGTTTAAAAACGAACTAACACTTATATGTAAACTTCAGCACATGAATCTTGTTCAACTACTTGGTTGTTGCATTCACGAAGAAGAGAAGATTCTGATTTACGAGTATATGCCCAACAAAAGCTTGGATTTCTATCTTTTCGATGGTACAAGAAGCAAATTACTAGATTGGAATAAGCGCTTCAACATAATACAAGGAATTGCTCAAGGATTATTGTATCTCCACAAGTACTCAAGACTCAAAGTCATTCATAGAGACTTAAAAGCTAGTAACATACTTCTTGATGAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCTAGAATATTTAGTCAACAAGACTCGACATCAAATACTAATAGAGTTGTTGGGACATATGGTTATATGTCTCCGGAATATGCTATGGAAGGAGTTTTTTCTACAAAGTCTGATGTATATAGTTTTGGAGTGATGTTGTTTGAAATTGTTAGTGGGCGAAAAAACACTAGTTTTTATGACGATGATCACCCAATAAATCTAATTGGACATGTATGGGAATTATGGAAAGATGGCAAGTGTTTTCAATCAGTGGATCCACCACTAAAGGAGTCATTTGATTATGATGAAGTGCAGAGGTGTATTCATGTTGGTCTCCTGTGCGTTGAACAATATGCAAGTGATCGACCTACAATGTCTGACATTATATCAATGTTGACAAACAAGAATGCAATAGTGTCTTTACCTAAAAGACCAGCATTCTATATTCAAAGAGAGATGTTTGATGAGAAATTATCTTCTTCAGTGTGTACTGCTTCTACAGTAGAAATTACTACTTCATTGGAAGTAGAATAA	2385	0.3866	MRPNLHKLLVFMYWWLWWTTSVHVEAADHSLKPGDTLNFSSPLLYSKNGKYFLDFYPTGRATERFTYLVIHSIHGNQIVWNGNREQSVDQSDAVLSLNFSGVLKIESGSVKKPIILYSPPQPINNTIATLLDTGNFVLQHLDPNGTNILLWQSFDYPTDTLIPTMKLGVNHKTGHHWLLVSQLTDVRATPGTFRLEWEPTTRELIIKRRGKVCWRSGKLRNNRFEHIPEDAQRVLNYTIVSNGDEDSFSFTSTNENHTHWWSLSDTGRLSYNFNEGYVARADLCYGYNSTGGCQLWQDIPKCRNPGDVFDKKSLQPNYENETVDENDNINHSDCEAACWSDCNCNGFTEHYLSGTGCRFYHWNSSKDYIVDGTVSGQDFYILENKGIIIQHHQGRKRWVWISPVIAATLLIICVSIVFLAIKKRQHVHQEMKQKEMAMQNSATADGLSLMEDFGNDLKKGHGLKVFDYTLVVAATNGFSFENKLGQGGFGPVYKGTLHTGEEVAIKRLSRSSAQGIVEFKNELTLICKLQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDGTRSKLLDWNKRFNIIQGIAQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGMARIFSQQDSTSNTNRVVGTYGYMSPEYAMEGVFSTKSDVYSFGVMLFEIVSGRKNTSFYDDDHPINLIGHVWELWKDGKCFQSVDPPLKESFDYDEVQRCIHVGLLCVEQYASDRPTMSDIISMLTNKNAIVSLPKRPAFYIQREMFDEKLSSSVCTASTVEITTSLEVE*	795

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g01806	794	CDD	STKc_IRAK	484	751	-	-
	Lapu11g01806	794	ProSiteProfiles	Bulb-type lectin domain profile.	28	151	IPR001480	-
	Lapu11g01806	794	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	446	553	-	-
	Lapu11g01806	794	Pfam	Protein tyrosine and serine/threonine kinase	479	724	IPR001245	GO:0004672\|GO:0006468
	Lapu11g01806	794	SUPERFAMILY	alpha-D-mannose-specific plant lectins	78	183	IPR036426	-
	Lapu11g01806	794	Pfam	PAN-like domain	314	361	IPR003609	-
	Lapu11g01806	794	PIRSF	SRK	275	793	IPR024171	GO:0004674
	Lapu11g01806	794	PIRSF	SRK	1	281	IPR024171	GO:0004674
	Lapu11g01806	794	ProSiteProfiles	Protein kinase domain profile.	478	756	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g01806	794	Gene3D	-	27	155	IPR036426	-
	Lapu11g01806	794	Pfam	D-mannose binding lectin	78	181	IPR001480	-
	Lapu11g01806	794	SMART	serkin_6	478	756	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g01806	794	Gene3D	Phosphorylase Kinase; domain 1	447	553	-	-
	Lapu11g01806	794	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	554	757	-	-
	Lapu11g01806	794	SMART	blect_4	35	157	IPR001480	-
	Lapu11g01806	794	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	599	611	IPR008271	GO:0004672\|GO:0006468
	Lapu11g01806	794	Gene3D	Transferase(Phosphotransferase) domain 1	554	759	-	-
	Lapu11g01806	794	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	128	773	-	-
	Lapu11g01806	794	SUPERFAMILY	Protein kinase-like (PK-like)	463	781	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g01806	Lapu-Chr11	31079438	31083454	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g01806	455	764	Receptor kinase-like Gene Family	AT4G11530	56.592	7.91e-122	380

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lapu11g01806		PK_Tyr_Ser-Thr	9.2e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g01806	-		-	vun:114168194	1064.29