Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01805 ATGAATCCAAAAATTTCAGATTTTGGAATAGCAAGAATGTTCACACAACAAGAATCATCCTCAAATACCAACAGAATTGTTGGAACACATGGTTACATGTCTTCAGAATATATGATGGAAGGAGCTTTTTCTACTAAGTCTGACGTTTATAGTTTTGGAGTGTTGTTACTTGAAATTGTTAGTGGAAGACGAAACCTTGGTTGCTATGATGCTGATCGCCCGTTAAATCTGATAGGTCATACATGGGAGTTATGGAAAGATGGTGCATGTTCAGAGTTAGTGGATCCATCAATAAACGAGTCATTTGATCCTGATGAAGTACAAAGATGCATTCATATTGACCACTTGTGTGTAGAACATTATGCAGATGATCGACCCACCATGTCTGACATTATATCAATGCTGACAAACAAAAGTGCAATAGTTTCCTTACCTCAAATACCAGCATTCTACGTTGGAAGAAAGATCCTTGATGATAAATTATCTTCAAAGGGGTTTTGTACTGATTCTGCAGTAGAAATTACAGCTTCTACAGTAGACACGACTGATTCCAAAGAAATAGAATCAAGACAGAGGCCATGCATCTTACTTGCAGAATTCCAAAGCTGA 609 0.3727 MNPKISDFGIARMFTQQESSSNTNRIVGTHGYMSSEYMMEGAFSTKSDVYSFGVLLLEIVSGRRNLGCYDADRPLNLIGHTWELWKDGACSELVDPSINESFDPDEVQRCIHIDHLCVEHYADDRPTMSDIISMLTNKSAIVSLPQIPAFYVGRKILDDKLSSKGFCTDSAVEITASTVDTTDSKEIESRQRPCILLAEFQS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01805 202 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 140 - -
Lapu11g01805 202 Pfam Protein tyrosine and serine/threonine kinase 4 134 IPR001245 GO:0004672|GO:0006468
Lapu11g01805 202 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 177 - -
Lapu11g01805 202 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01805 202 Gene3D Transferase(Phosphotransferase) domain 1 1 144 - -
Lapu11g01805 202 SUPERFAMILY Protein kinase-like (PK-like) 2 154 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01805 Lapu-Chr11 31074106 31078866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01805 1 151 Receptor kinase-like Gene Family AT3G45860 54.902 4.38e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01805 PK_Tyr_Ser-Thr 1.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01805 - - vun:114168194 355.525