Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01804 ATGACCCTCCTTCACCTTTTTTTAGTCTTTCCGAGTTTGAAACATGCTATCAAGCATAAGCTACAGAAGCTGCTTGCTTTTGTGTACTTGTGGTTGTGGTGGAGTACTTGTATTCATGTTGAAGCTGCAAATGACAGTTTAAAGCCTGGTGATGCCCTGAATAACACAGATACACAAGGAATAACTTCAAAAAATGGCAAATACTGTCTAGCTTTTACATCGGTAGCTAGTGATGAGAACATTTACTTGGTTGTATACAATTTACATAGGAATTTGGAAGTTTGGATGAGTGATGGAAGCCAACCTGTTGACAGAGATTCTGCAGTTCTGTCACTTAACCATTCTGGTGTGCTAAAAATAAGATCTCAACGTGGGAAGCCGATAATACTGTATTCTCCACCTCAACCTATCAACAACACAAAGGCCACCTTGTTGGACTCAGGCAACTTTGTGCTTCAACAACTTCACCCCAATGGGACAAACACTCTCTTGTGGCAGAGTTTTGATGATCCCACTGACATTTTGATCCCCACCAAGAAATTAGGTGTTAATCACAAAACAGGCCAGCATTGGTTACTGGTTTCATGGTTCACAAAAGCAGTTGCCGCTCCCGGTGCCTTTAGCCTTGAATGGGAACCTGTGGAACAAGAATTGATCATAAGGAGACGGGGAAAAGTTTGTTGGCGAAGTGGAAAACTGAGGAACAATAGGTTTGAGCACATTTCGGAGGATGCACAACGCATGTTGAAGTACACCATTGTGTCAAATGGGGATGAAAACTCCTTCTCTTTCACAACAACTACCAATAAAGAGCCTGATCAATGGTGGCTATTAACAGAAATTGGTCAGATATCTAATGATAAAGGATATGTTGGAAGGGCTGATTTGTGTTATGGATATAACAACACTGATGGAGGGTGTCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATGTGTTTCAGAAAAATATCGGTTACTTCAGTTATCAGAATTTAAGCTTTGAAGAAAATGCAAGTTATGGTTACAGTGATTGTCAAACCAGTTGCTGGAGCAATTGTACTTGCAGTGGATTCAAGGAACTCTATCGTAATGGAACTGGATGTATATTCTTTCATTGGATTTCAGCGGAAAATTATACGTCTGACAGTACTGGTGAAAACTTTTACATGCTGGTGAACACGTTAACTCATCATAAGGGTACAAAAAAGGGGACATGGATAGGTGCAGTAGCAGCAACTGCCCTACTTGCAATTTGCCTATTCACTATTTGCCTAGCCTTAAAGAAACGAAAATATGTGCTTCAAGAGAAGAAAAGGGAAAGGATGGTGATGAAGCTGATACATTTGGCAACTTGTAGTCGGTCATCTGGCATGGAAGATTTTGAAGTTGATTTAAAAAAGGGAAATGGCCTGAAAATGTTTGAGTATAGATCAGTTATAGCAGCAACAAATGGATTTTCATCGGAGAATAAGTTAGGACAAGGAGGCTTTGGACCTGTTTATAAGGGAATTCTTCCAACAGGGCAAGAGATTGCCGTAAAAAGGCTTTCAAAAACTTCTGGACAAGGAGTCGTGGAGTTTAAGAATGAACTAACACTCATATGTGAACTTCAGCATACGAATCTTGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAATAAAAGTTTGGATTTCTATCTATTCGATTGTACACGAAGCAAATTACTAGATTGA 1755 0.3972 MTLLHLFLVFPSLKHAIKHKLQKLLAFVYLWLWWSTCIHVEAANDSLKPGDALNNTDTQGITSKNGKYCLAFTSVASDENIYLVVYNLHRNLEVWMSDGSQPVDRDSAVLSLNHSGVLKIRSQRGKPIILYSPPQPINNTKATLLDSGNFVLQQLHPNGTNTLLWQSFDDPTDILIPTKKLGVNHKTGQHWLLVSWFTKAVAAPGAFSLEWEPVEQELIIRRRGKVCWRSGKLRNNRFEHISEDAQRMLKYTIVSNGDENSFSFTTTTNKEPDQWWLLTEIGQISNDKGYVGRADLCYGYNNTDGGCQRWQDIPKCRNPGDVFQKNIGYFSYQNLSFEENASYGYSDCQTSCWSNCTCSGFKELYRNGTGCIFFHWISAENYTSDSTGENFYMLVNTLTHHKGTKKGTWIGAVAATALLAICLFTICLALKKRKYVLQEKKRERMVMKLIHLATCSRSSGMEDFEVDLKKGNGLKMFEYRSVIAATNGFSSENKLGQGGFGPVYKGILPTGQEIAVKRLSKTSGQGVVEFKNELTLICELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTRSKLLD* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01804 584 Pfam D-mannose binding lectin 94 196 IPR001480 -
Lapu11g01804 584 Pfam Protein tyrosine and serine/threonine kinase 492 577 IPR001245 GO:0004672|GO:0006468
Lapu11g01804 584 Gene3D Phosphorylase Kinase; domain 1 451 564 - -
Lapu11g01804 584 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 232 IPR036426 -
Lapu11g01804 584 ProSiteProfiles Bulb-type lectin domain profile. 44 165 IPR001480 -
Lapu11g01804 584 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 37 574 - -
Lapu11g01804 584 SUPERFAMILY Protein kinase-like (PK-like) 472 579 IPR011009 -
Lapu11g01804 584 Gene3D - 38 168 IPR036426 -
Lapu11g01804 584 ProSiteProfiles Protein kinase domain profile. 489 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01804 584 SMART blect_4 52 171 IPR001480 -
Lapu11g01804 584 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 454 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01804 Lapu-Chr11 31074106 31078866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01804 465 584 Receptor kinase-like Gene Family AT3G45860 57.500 9.20e-39 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01804 B_lectin 3.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01804 - - vun:114168194 967.222