Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01796 ATGAAGGATGGTGGCAGAAAACAAGGTGCAATGTCACCATGTGCAGCATGCAAGCTTCTTCGAAGGAGATGTGCACAGGATTGTGTGTTTGCTCCTTATTTCCCTGCTGATGAGCCTCATAAGTTTGCCAGTGTGCACAAGGTTTTCGGAGCTAGCAATGTCAACAAAATGTTACAGGAACTACCAGAGTACCAACGAAGTGATGCTGTTAGTTCAATGGTATATGAAGCAAATGCAAGGGTGAGAGATCCTGTGTATGGGTGCGTGGGAGCCATATCCTCTCTGCAGCAACAAGTTGATGTTTTACAAACCCAGTTGGCTCTTGCACAAGCAGAGGTTGTGCAGATGAGAATGAGCCAAGCCTCAGCTTCCTCTCATCAACGCAAAGCACTGCCTGCAGCCTCCAATTCATCCTCAGAGAACCTTTCTCCGTCAACAAGACTCGCCAAGTCCCTTTTTGCCATGGACATGGTCGTTGATCAGCCACGCATGGGCGAGTCCTTGTGGTCATGT 513 0.4834 MKDGGRKQGAMSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEYQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVQMRMSQASASSHQRKALPAASNSSSENLSPSTRLAKSLFAMDMVVDQPRMGESLWSC 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01796 171 MobiDBLite consensus disorder prediction 124 143 - -
Lapu11g01796 171 Coils Coil 92 112 - -
Lapu11g01796 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 141 - -
Lapu11g01796 171 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lapu11g01796 171 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01796 Lapu-Chr11 30797984 30802657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01796 1 171 AS2 family AT1G31320 68.023 4.57e-72 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu11g01796 LOB 3.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01796 - - ccaj:109811748 262.307