Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01790 ATGGACACTGATTCAGTGGGAAGCAAAGAGTACTCTCTGCTGAAGGATTTAAGACTCGAAATTGAAGCCAAGGATGGCACTTTCTCTCTCTGCTTTTGGCTTTATTTCACTAGTTCTTCTACATTCCCCGTTACCATTATTCAACAGGTTTACTCTGATATCTCCGAAAGTGCTCCTTTTCTTGTTATTGATGATAATAAGAGAATCCATTTGTTACCAGTTCTTCTCTTACACGAAGAAGCTCCTGATACTGGCAATATAAATTCCTGGGCAGAAGTTCCACATGCAACAGTTGACTTTAAGTTTCCTTTGGAAAAATGGGTTCATGTTGGATGTCAGGTTTGTCCAGATTATATCCAGCTTCGGATTAATGGAGAGATTGTAGGAGAAAAATCTTTGTGTTCCTTATTAAATGAGGAGTCTGGTTCAAGTGATTTGAAGAAACTGACGTTGGCAAATGTTGGTGGAGATGGAAATAGTGTGCAGGGTTATGTGCACAATTTTGAAATATTTCCTATTATTTCTTCTATTAACGATTACCATCTCAAGGACCCTCCTTTGAAGTTATCAATTGATGAATCATCTATCTCTGAAATTGAAGAAGAAAGTGATGGCATTTGGGGTGTTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTATCAGATGCTTTCGGACAGCCTGTAGATAAGGAGAATGAGATTTTTGCTTCACTTTTGTATGCTGATACCAGAGCACCAGTGGAGAATACAACAGACAATGAAGCACCCCTTTTAGCCAGTTATGATGGAATAGAATTTTCTTCTTATGAAAGACCAAGTAAGCTTTTGATGGGACGTGCTTCATTTAAGCTCAAAATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTCTTCCTCATCAGATTTTGTGTTCCAAAACTAGGAAATTATCCTTTTCTTGAGACATACTCCCATCCAATTCGATGCATCTCCAGAAGCCGAAACACAAGATTGTCCACTTTGGTGTGGAAAAGGTCAACTGCTCTTAATTGCCCTAGTGTATCTCAATCTTCAGCTTTGGATGATGGGTCCTTGGAACTTCAGCATTCAGGTCTTGAAGCACAAGCCAATCCACTAACGAAGAAGTTTAGACTTGGTCAAGACAAGATATCTGTATCAGTGAAGGCTGACCCCACCTTAGAGCAACCTGATGAAGAATGTAACTCTCATGTCCGTACTGCTAACCAGGTTGAAAATGAATGTCCAAGAAGCTTCGATGGAAGGCCCGCAAACTTCAATGAAGCATATGATTCTCCATCTGATACCGAGAGTATAGGGGAGGGAAATTCACCTTTAAATAATATGGCAAGTAAAAGATGCCCAATATCTGATATGACCATTTTCAAATACTGCCTTGCGAGCTTGGCTGAGAGATCTCTCATACTTAAGGAAATTGCTTCCTCTGCTTCTGACAAAGAAATTTTAGATTTTGCTAATCGTGTGTCACACTATTCAGGATGTTCGCATCATGGAAATCAAATATTAATTGCCAAGAGATTGATAAAAGATGGAACTAATCTCTGGAAGGTGATGTCTCCAAACAATCACCACATTCCTTGGGAGAATGCAGTGTATGAGATTCAAGAGCAATTTATGAAGATTGCTTCTTGCGGTTCAAGGTCTCTCTCACCTCAGGACCTAAATCTTCTGAGAAGAATCGCTGGATGTCAAGAGTACCTAACACAAGAGAACTTCGAGAAGTTGTGGTGTTGGTTATACCCTGTGGCATTTACAATATCAAGGGACTGGATAAATCCTATCTGGAATTCCACATCACCTAAGTGGATAGAAGGGTTCATAACCAAGGAAGAAGCAGAAGCTTCACTACAAGGTCCCACAGGATTTCAAGAACCTGGTACCTTTATACTCCGATTTCCTACATCACGAAGCTGGCCACACCCAGATGCCGGTAGCCTAGTTGTCACCTATGTTGGCAGTGACTACAAACTGCACCACAGGCTACTTTCTTTGCATCAGGTTTATGGCTCTGGGGATAAAAGAGTTGACATGAAACCGCTTCAAGATATGCTATTGGCAGAACCTGAGCTGTCTCGATTGGGAAGGATAATAAGAAGTCATTAG 2139 0.4067 MDTDSVGSKEYSLLKDLRLEIEAKDGTFSLCFWLYFTSSSTFPVTIIQQVYSDISESAPFLVIDDNKRIHLLPVLLLHEEAPDTGNINSWAEVPHATVDFKFPLEKWVHVGCQVCPDYIQLRINGEIVGEKSLCSLLNEESGSSDLKKLTLANVGGDGNSVQGYVHNFEIFPIISSINDYHLKDPPLKLSIDESSISEIEEESDGIWGVVGGKASCRRNFSLDVVLSDAFGQPVDKENEIFASLLYADTRAPVENTTDNEAPLLASYDGIEFSSYERPSKLLMGRASFKLKISQLSSKCDNRFFLIRFCVPKLGNYPFLETYSHPIRCISRSRNTRLSTLVWKRSTALNCPSVSQSSALDDGSLELQHSGLEAQANPLTKKFRLGQDKISVSVKADPTLEQPDEECNSHVRTANQVENECPRSFDGRPANFNEAYDSPSDTESIGEGNSPLNNMASKRCPISDMTIFKYCLASLAERSLILKEIASSASDKEILDFANRVSHYSGCSHHGNQILIAKRLIKDGTNLWKVMSPNNHHIPWENAVYEIQEQFMKIASCGSRSLSPQDLNLLRRIAGCQEYLTQENFEKLWCWLYPVAFTISRDWINPIWNSTSPKWIEGFITKEEAEASLQGPTGFQEPGTFILRFPTSRSWPHPDAGSLVVTYVGSDYKLHHRLLSLHQVYGSGDKRVDMKPLQDMLLAEPELSRLGRIIRSH* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01790 712 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 173 IPR013320 -
Lapu11g01790 712 SUPERFAMILY SH2 domain 608 699 IPR036860 -
Lapu11g01790 712 Gene3D SH2 domain 600 709 IPR036860 -
Lapu11g01790 712 MobiDBLite consensus disorder prediction 419 453 - -
Lapu11g01790 712 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 24 703 IPR001217 GO:0003700|GO:0006355|GO:0007165
Lapu11g01790 712 MobiDBLite consensus disorder prediction 434 453 - -
Lapu11g01790 712 CDD SH2_SHA 603 712 - -
Lapu11g01790 712 ProSiteProfiles Src homology 2 (SH2) domain profile. 614 712 IPR000980 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Lapu11g01790 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01790 - - gmx:100803169 1269.22