Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01789 ATGCTGAAGTACACCATTGTGTCTAATGGGGATGAAAACTCCTTCTCTTTCACAACTACAAATAAAGAGCATGATCTATGGTGGAAATTATCCTATATTGGGCAGCTATCTGATGGTAGCGGATATATTGGAAGGGCTGATTTGTGTTATGGATATAACAACACTGATGGAGGGTGCCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATATATTTCAGAAAAATATCGGTTACTTCAGTTATCAGAATTTAAGCTATGAAGAAAATACAAGTTATGGTTACAGAGATTGTGAGGCCAGTTGCTGGAGCAATTGTATTTGCAGTGGATTCAAGGAATTGTATCGTAATGGAACTGGATGTATATTCTTTCATTGGATTTCAGCGGAAAATTATACTTCTGACAGTACTAGTGAAAACTTTTACATGCTGGTGAACACGTTAACTCATCATAAGGGTACAAAAAAGGGGACATGGATAGGTGCAGTAGCAGCAACTGCCCTACTTGCAATTTGCCTATTCACTATTTCCCTAGCCTTAAAGAAACGAAAATATGTGCTTCAAGAGAAGAAAAGGGAAAGGATGGTGATGAAGATGCTATGTTTGGCGACTTGTAGTCGATCATCTGGCATGGAAGATTTTGAAGTTGATTTAAAGAAGGGACATGGCCTGAAAATGTTTGAGTATAGATCAGTTATAGAAGCAACAAATGGATTTTCGTCGGAGAATAAGTTAGGACAAGGAGGCTTTGGACCAGTTTATAAGGGAATTCTTCCAACAGGGCAAGAGATTGCCGTAAAAAGACTTTCAAAAACTTCTGGACAAGGAGTCGTGGAGTTTAAGAATGAACTAACACTCATATGTGAACTTCAGCATACGAATCTTACATGGGAGTTATGGAAAGATGGTGCATGTTCAAAGTTAGTGGATCCATCAATAAACGAATCATTTGATCATGATGAAGTACCAAGATGTATTCATATTGGTCTTTTGTGTGTAGAACTGTGA 1014 0.3826 MLKYTIVSNGDENSFSFTTTNKEHDLWWKLSYIGQLSDGSGYIGRADLCYGYNNTDGGCQRWQDIPKCRNPGDIFQKNIGYFSYQNLSYEENTSYGYRDCEASCWSNCICSGFKELYRNGTGCIFFHWISAENYTSDSTSENFYMLVNTLTHHKGTKKGTWIGAVAATALLAICLFTISLALKKRKYVLQEKKRERMVMKMLCLATCSRSSGMEDFEVDLKKGHGLKMFEYRSVIEATNGFSSENKLGQGGFGPVYKGILPTGQEIAVKRLSKTSGQGVVEFKNELTLICELQHTNLTWELWKDGACSKLVDPSINESFDHDEVPRCIHIGLLCVEL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01789 337 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 298 336 - -
Lapu11g01789 337 SUPERFAMILY Protein kinase-like (PK-like) 226 297 IPR011009 -
Lapu11g01789 337 Gene3D Phosphorylase Kinase; domain 1 196 301 - -
Lapu11g01789 337 Pfam Protein tyrosine and serine/threonine kinase 244 297 IPR001245 GO:0004672|GO:0006468
Lapu11g01789 337 ProSiteProfiles Protein kinase domain profile. 241 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01789 Lapu-Chr11 30689531 30691765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01789 219 298 Receptor kinase-like Gene Family AT4G04500 63.750 5.80e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01789 PK_Tyr_Ser-Thr 1.8e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01789 - - vun:114168194 513.457