Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01788 ATGAGGCCTAAACTACAAAAACTGCTTGTTTTCATGTACTTGTGGTTGTGGTGGAGTACTTCTGTTCACGTTGAAGCAGCAGATGACAGTTTAAAGCCCGGTGACACACTGAATTCCTCTTCACCACATCTATATTCTAAGAGTCGCAGATATTGTCTACGTTTTTTTAGGATTATAAATTTGATAGGAACTTTTAATTACTTGGTAATACAAAGTGCATACGAGGATCAGGTAGTTTGGAAGGGTAATAGAGAACAATATATCCACTACACTGACGCAGTTCTATCCCTAAACTTCTCTGGCGTGCTGAAAATAGAATCTGGACATCTGAAAAAGCCTATTATCCTTTATTCTCCTCCTCAACCTATCAACAACACTATAGCCACTTTGTTGGACACAGGCAACTTCGTGCTTCAACACCTTCACCCCAATGGGACAAACATTCTCTTGTGGCAGAGTTTCGATTATACCACTGACACTTTGATTCCCACCATGAAGCTAGGTGTTAATCACAAAACAGGCCATCAATGGTTACTTGTTTCACAGTTGACCGATGCTCGTGCCACTCGAGGTACCTTTAGTCTTGAATGGGAACCTACAGGACAAGAATTGATCATAAGGAGACGAGGAAAGGTTTGTTGGAAAAGTGGGAAACTGAGGAACAATAGATTTGAGCACATTCCGGAAGATGCACAGCGCGTGTTGAAGTACACCATAGTGTCTAATGGAGAAGAAGACTCCTTCTCTTTCACATCTACAGATGAAAACCTTACACAATGGTGGTTCCTATCAGATACTGGACGCTTATCTTACAATCACAGTGAAGGATATGTTGCAAGGGCTGATCTGTGTTATGGATATAACAGCAGCGGAGGGTGCCAACTATGGCAGGATATACCTAAGTGCAGGAATCCTGGTGATGTGTTTGACAAAAAGATTCTTCGCAGCAATTATGAAAATGCAACCTTTGAAGAAAATCAGAATATTAATCACAGTGATTGTGAGGCTGCTTGCTGGAGTGATTGTAAATGCAACGGATTCACAGAACTCTTTGTTGATGGAGTTGGATGTATGTTCTATCACTGGAATTCATCGAAAGATTATATAGTTGACGGTACTGTTTCGGGTCAAGACTTTTACGTACTGGAGAACAAAGGGATCATAATCCAGCGTCATCAAGGTACAAAAAGGTGGGTGTGGATAAGTCCAGTAATAGCAGCTACTTTACTGATCATATGCGTATCCATTCTATGCCTAGCCATAAAGAAACAAATACATGTGCGTCAAGACAAGAAAAGGAAAGAAATGACGATGCAACATTCAGCAAATCTAATAGAAGATTTTGGAAATGATTTGAAAAAGGGACACGGTTTAAAAGTATTAGATTATACATCGGTTGTGGCTGCCACAAATGGGTTTTCATTTGAAAATAAGTTAGGACAGGGAGGTTTTGGACCAGTTTATAAGGGAACTTTGCCCACAGGAGAGGAGGTTGCTATAAAAAGACTTTCAAGAAACTCTGCACAAGGAATTGTGGAGTTTAAAAACGAACTAACACTTATATGTGAACTTCAGCACATGAATCTTGTTCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAGTATATGCCCAACAAAAGCTTGGATTTCTATCTTTTCGATTGCACAAGAAGCAAATTATTAGATTGGAATAAGCGCTTCAACATAATACAAGGAATTGCTCAAGGATTACTATATCTTCACAAGTACTCAAGACTCAAAGTCATTCATAGAGATTTGAAAGCTAGTAACGTACTTCTGGATGAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCTAGAATATTTACTCAACAAGATCCGATATCAAACACAAACAGAGTTGTTGGGACA 1914 0.3898 MRPKLQKLLVFMYLWLWWSTSVHVEAADDSLKPGDTLNSSSPHLYSKSRRYCLRFFRIINLIGTFNYLVIQSAYEDQVVWKGNREQYIHYTDAVLSLNFSGVLKIESGHLKKPIILYSPPQPINNTIATLLDTGNFVLQHLHPNGTNILLWQSFDYTTDTLIPTMKLGVNHKTGHQWLLVSQLTDARATRGTFSLEWEPTGQELIIRRRGKVCWKSGKLRNNRFEHIPEDAQRVLKYTIVSNGEEDSFSFTSTDENLTQWWFLSDTGRLSYNHSEGYVARADLCYGYNSSGGCQLWQDIPKCRNPGDVFDKKILRSNYENATFEENQNINHSDCEAACWSDCKCNGFTELFVDGVGCMFYHWNSSKDYIVDGTVSGQDFYVLENKGIIIQRHQGTKRWVWISPVIAATLLIICVSILCLAIKKQIHVRQDKKRKEMTMQHSANLIEDFGNDLKKGHGLKVLDYTSVVAATNGFSFENKLGQGGFGPVYKGTLPTGEEVAIKRLSRNSAQGIVEFKNELTLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDCTRSKLLDWNKRFNIIQGIAQGLLYLHKYSRLKVIHRDLKASNVLLDENMNPKISDFGMARIFTQQDPISNTNRVVGT 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01788 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Lapu11g01788 638 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 181 IPR036426 -
Lapu11g01788 638 Pfam Protein tyrosine and serine/threonine kinase 474 628 IPR001245 GO:0004672|GO:0006468
Lapu11g01788 638 Gene3D - 22 155 IPR036426 -
Lapu11g01788 638 Gene3D Transferase(Phosphotransferase) domain 1 549 638 - -
Lapu11g01788 638 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 549 638 - -
Lapu11g01788 638 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Lapu11g01788 638 SMART blect_4 35 157 IPR001480 -
Lapu11g01788 638 SUPERFAMILY Protein kinase-like (PK-like) 459 638 IPR011009 -
Lapu11g01788 638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 125 638 - -
Lapu11g01788 638 SMART serkin_6 473 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01788 638 Pfam D-mannose binding lectin 78 181 IPR001480 -
Lapu11g01788 638 Pfam PAN-like domain 316 361 IPR003609 -
Lapu11g01788 638 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 435 548 - -
Lapu11g01788 638 Gene3D Phosphorylase Kinase; domain 1 427 548 - -
Lapu11g01788 638 ProSiteProfiles Protein kinase domain profile. 473 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01788 Lapu-Chr11 30657688 30664254 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01788 431 638 Receptor kinase-like Gene Family AT4G23140 56.731 3.51e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01788 PK_Tyr_Ser-Thr 1.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01788 - - vun:114169232 951.044