Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01787 ATGGCGATGCAACATTCAGCAACTCTAATAGAAGATTTTGGAAATGATTTGAAAAAGGGGCACGGTTTAAAAGTATTCGATTATACATTGGTTGTGGCGGCCACAAATGAGTTTTCATTTGAAAATAAGTTAGGACAGGGAGGTTTTGGACCAGTTTATAAGGGAACTTTGCCCACAGGAGAGGAGGTTGCTATAAAAAGACTTTCAAGAAGCTCTGCACAAGGAATTGTGGAGTTTAAAAACGAACTAACACTTATATGTGAACTTCAGCACATGAATCTTGTTCAACTACTTGGTTGTTGCATTCATGACGAAGAGAAGATTCTTATTTACGAGTATATGCCCAACAAAAGCTTGGATTTCTATCTTTTCGATTGCACAAGAAGCAAATTATTAGATTGGAATAAGCGCTTCAACATAATACAAGGAATTGCTCAAGGATTACTGTATCTTCACAAGTACTCAAGACTCAAAGTCATTCATAGAGACTTGAAGGCTAGTAACATACTTCTTGATAAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCTAGAATGTTTACCGAACACGATTCAGTATCAAACACAAACAGGATTGTTGGAACATATGGTTATATGTCTCCAAAATATGCTATGGAAAGAGTTTTCTCTACAAAGTCTAATGTGTATAGCTTTGGAGTGTTATTGCTTGAAATTGTTAGTGGAAGAAAAAACACTAGTTTTTATGATGATGAGCACCCTTTGAATCTAGTTGGACATGTATGGCAATTGTGGAAAGATGACAAGTATCTTCAATTAGTAGATCCATCCTTAAATGAGTTATTTGATCATGAGGAAATGCAAAGATGTATTCATATTGGCCTCTTGTGTGTTGAACATTATGCAAACGATCGACCCACTATGTCTGACATTATATCAATGTTGACAAACAAAAGTGAAATAGTCTCCTTGCCTCAGAGACCAGCATTTTATGTTCAGAGAGAGATGAGTATAGAAAATTTATCCTCATTAGAGTTGTGTACTACTTCAACCATAGAAATTACTGCTTCTGTCTAA 1059 0.3522 MAMQHSATLIEDFGNDLKKGHGLKVFDYTLVVAATNEFSFENKLGQGGFGPVYKGTLPTGEEVAIKRLSRSSAQGIVEFKNELTLICELQHMNLVQLLGCCIHDEEKILIYEYMPNKSLDFYLFDCTRSKLLDWNKRFNIIQGIAQGLLYLHKYSRLKVIHRDLKASNILLDKNMNPKISDFGMARMFTEHDSVSNTNRIVGTYGYMSPKYAMERVFSTKSNVYSFGVLLLEIVSGRKNTSFYDDEHPLNLVGHVWQLWKDDKYLQLVDPSLNELFDHEEMQRCIHIGLLCVEHYANDRPTMSDIISMLTNKSEIVSLPQRPAFYVQREMSIENLSSLELCTTSTIEITASV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01787 352 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 114 317 - -
Lapu11g01787 352 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01787 352 Gene3D Phosphorylase Kinase; domain 1 7 113 - -
Lapu11g01787 352 Pfam Protein tyrosine and serine/threonine kinase 39 309 IPR001245 GO:0004672|GO:0006468
Lapu11g01787 352 SUPERFAMILY Protein kinase-like (PK-like) 23 331 IPR011009 -
Lapu11g01787 352 Gene3D Transferase(Phosphotransferase) domain 1 114 321 - -
Lapu11g01787 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Lapu11g01787 352 CDD STKc_IRAK 44 311 - -
Lapu11g01787 352 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 3 113 - -
Lapu11g01787 352 PIRSF ILK 14 321 - -
Lapu11g01787 352 SMART serkin_6 38 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01787 352 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01787 Lapu-Chr11 30618892 30625531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01787 4 352 Receptor kinase-like Gene Family AT4G11480 52.707 2.92e-127 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01787 PK_Tyr_Ser-Thr 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01787 - - vun:114169229 617.461