Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01781 ATGGAAGGAATTTTTTCTACAAGATCTGACGTCTACAGCTTTGGAGTGCTGCTACTTGAAATTGTTAGTGGAAGAAGAAACAGTAGCTTCTATGATGTTGATCACCCTCTTAATCTAGTAGGACATGCGTGGGAGTTATGGAAAGAAGGTGAAGTTATCCAATTAATGGATCCATCATTAAGTAATTCATTTGATCTTGATGAAGTGAAAAGATGCATCCAGGTGGGTCTCTTATGTGTAGCACAATATGCAAATGATCGACCAACAATGTCTAATGTGGTATCAATGCTAACAAAAGAAAGTGCAATAGTTACCTTGCCTCAAAAACCTGCTTTCTATTTGGAAAGAGATTACTCTGATAAGAAAGTGTCATTTTTAGAGTTTAATACCGACTCTATGGAAGAAATTAGTGCTTCCTCGTAA 423 0.3664 MEGIFSTRSDVYSFGVLLLEIVSGRRNSSFYDVDHPLNLVGHAWELWKEGEVIQLMDPSLSNSFDLDEVKRCIQVGLLCVAQYANDRPTMSNVVSMLTKESAIVTLPQKPAFYLERDYSDKKVSFLEFNTDSMEEISASS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01781 140 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Lapu11g01781 140 SUPERFAMILY Protein kinase-like (PK-like) 4 124 IPR011009 -
Lapu11g01781 140 Pfam Protein tyrosine and serine/threonine kinase 3 97 IPR001245 GO:0004672|GO:0006468
Lapu11g01781 140 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01781 Lapu-Chr11 30517848 30518348 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01781 2 139 Receptor kinase-like Gene Family AT4G11460 47.143 3.90e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01781 PK_Tyr_Ser-Thr 9.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01781 - - vum:124831793 233.032