Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01777 ATGGCTTGCAGTGAACAAGGGAAATCTCATGTGTCGCCACTTCTGACCTACTTCTTGTTGTGGTGCACTACATGTGTCCATGTTGAAGCCACCAATAATATTTTGAAGCCAGGTGATACGTTGAATGCAACAGAAGAGGCCAAACTATGTTCAGAAAAGGGTAAATATTGCATGTACTTTCGCTCAACATTTGATGATGACAGTGTAGCTAACTTGTACATATATGCCCAAAAGGATGATTGGGCTGTGTGGATTGGTAATAGAGATGAACCTGTTGACACAGATTCTGCAGTTCTATCATTGAATCATTCTGGGGTACTCAAAATAGAATCTCAACATGGCAAAAAAGAAATCATCCTTTATTCACCACCTCAAGCTACCAACAACACTGTGGCCATATTGTTGGACACAGGCAACTTTGTGCTTCAGCAACTTCACCCCAATGGGTCTACAATTGGTTCGTTGTGGGAAAGTTTTGATTTTCCCACCGACACTTTGCTCCCAGGGATGAAGTTAGGTGTGAATCACAAAACTGGTCGTAAATGGTCACTGGTTTCATGGTTGAGTAAACATCTTCCTACTCCTGGTCCTTTCAGGCTTGAGTGGGAGCACAAAGCAAAACAGTTGATGATCAAGAGAGGAGAAAAGCTTTACTGGGTTGCCAGTGAAAACGAGTTGGAGCACATCTTGGGGGAGGCTTATCACAACATTGTGTTTGTTTCCAATGAAAATGAAGCCTATATCACATTGAGAAGATCAAATGAAGAGCTCACAAAGTGGACACTGTTATCCACTGGACAACTGATAAACCGAAATGGAGGTGATGTTGCAAGGGCTGATCTGTGTTATGGATACAACACAGATGGAGGGTGCCAAACATGGGAGGAGAAACCCTCTTGCAGAAATTCTGGTGATGCATTTGAACTGAAGCAAGGTTATGCCAATTTTGACTTGGACATGAAAAGAGATGAAGCAAATTCAAGTTATGGCATAAATGATTGCCAAGCTATTTGCTGGAGCACCTGCAGCTGTGTTGCATTCACTCATCTTTATGAGAATGAAACTGGTTGTACCTTCTTTCTGTGGAATTCTACCAAGGGTACCAATATTGCAAGCGAGGGTGAAAAGTTTTACATGCTAGTAAAGGGTAACCATCACAGAAGTACAAAAAAATGGATATGGGCAATTGTTGCAATAGGAGCAACTATACTCATAATCTGCCTCTTCCTTCTGTGTCGTAAAGTCTTAAGGAAAAGAAAATATGCTCTTGAAGAGCTAAAAGCAAAGAGAATGGGGATTGAGAAGGAGGATCTTGAAGCTTCAAGTAGATCTTCTTGTGCAGAAAAACTAGAAGTTGTTTTAAAGGAGGAACATGACTTGAAAGTTTTTAGGTATGCATCAATAATGGAGGCTACAAATGACTTTTCATCTGAAAACAAGTTAGGACAAGGAGGCTTTGGACCAGTTTATAAGGGGATTCTACCTACAATGCAGGAAGTTGCTGTGAAAAAACTTTCAAAATCTTCTGGACAAGGTCTAGTTGAATTTAAAAATGAATTAACAGTCATATCTAAACTCCAGCACACAAATTTGGTTCAGCTACTCGGTTACTGCATTCACGAAGAAGAGAGGATTTTGATTTATGAATATATGCCTAACAAAAGCTTGGACTTCATTTTATTTGATTCAACTCAAAATCAGTTGCTAGATTGGAATAAGCGTTTCAGTATAATAGAAGGAATTGCTCAAGGATTACTATACCTTCACAAGTACTCAAGACATAGAATCATTCACAGAGACTTGAAGGCTAGCAACATACTCCTTGATGAGAATATGAACCCCAAAATTTCTGATTTTGGCATAGCAAAAATGTTCACACAGCAGGATTCTGAATCAAATACAACCAGGATTGTTGGCACTTATGGTTACATGTCGCCTGAATATGCCATGGAAGGAGTGTTCTCAACAAAATCTGATGTATATAGCTTTGGAGTGTTACTCTTTGAAATTGTTAGTGGTAAAAGAAACAATAGCTTCTACACTGAAGAAAGACAACTCAATCTAGTAGGACATACATGGGAGCTATGGAAAGAAGGTGAAGTTCTTAAGTTGGTGGATCCATCACTAAATGATTCATTTTCAGAGGATGAAGTGCTAAGATGTGTGCATGCTGGTCTATTATGTGTGGAAGAAAATGCAGATGATCGCCCCTCCATCTCCAACATTGTATCTATGTTAACCAACAAAAGTAAAGTGACTACTTTGCCTAAAAAACCAGCATATTATGTTAGAACAAAAGTCCTTGGTGAAGAAATGTCCACTAAAGAATTTGGTTTAGATTCCACACAAGAGAATTCCCTTTATGGATGTTCAATTTGA 2379 0.3913 MACSEQGKSHVSPLLTYFLLWCTTCVHVEATNNILKPGDTLNATEEAKLCSEKGKYCMYFRSTFDDDSVANLYIYAQKDDWAVWIGNRDEPVDTDSAVLSLNHSGVLKIESQHGKKEIILYSPPQATNNTVAILLDTGNFVLQQLHPNGSTIGSLWESFDFPTDTLLPGMKLGVNHKTGRKWSLVSWLSKHLPTPGPFRLEWEHKAKQLMIKRGEKLYWVASENELEHILGEAYHNIVFVSNENEAYITLRRSNEELTKWTLLSTGQLINRNGGDVARADLCYGYNTDGGCQTWEEKPSCRNSGDAFELKQGYANFDLDMKRDEANSSYGINDCQAICWSTCSCVAFTHLYENETGCTFFLWNSTKGTNIASEGEKFYMLVKGNHHRSTKKWIWAIVAIGATILIICLFLLCRKVLRKRKYALEELKAKRMGIEKEDLEASSRSSCAEKLEVVLKEEHDLKVFRYASIMEATNDFSSENKLGQGGFGPVYKGILPTMQEVAVKKLSKSSGQGLVEFKNELTVISKLQHTNLVQLLGYCIHEEERILIYEYMPNKSLDFILFDSTQNQLLDWNKRFSIIEGIAQGLLYLHKYSRHRIIHRDLKASNILLDENMNPKISDFGIAKMFTQQDSESNTTRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLFEIVSGKRNNSFYTEERQLNLVGHTWELWKEGEVLKLVDPSLNDSFSEDEVLRCVHAGLLCVEENADDRPSISNIVSMLTNKSKVTTLPKKPAYYVRTKVLGEEMSTKEFGLDSTQENSLYGCSI* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01777 792 Gene3D Transferase(Phosphotransferase) domain 1 551 761 - -
Lapu11g01777 792 CDD STKc_IRAK 481 748 - -
Lapu11g01777 792 PIRSF SRK 279 789 IPR024171 GO:0004674
Lapu11g01777 792 PIRSF SRK 6 281 IPR024171 GO:0004674
Lapu11g01777 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 440 550 - -
Lapu11g01777 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Lapu11g01777 792 Pfam Protein tyrosine and serine/threonine kinase 478 746 IPR001245 GO:0004672|GO:0006468
Lapu11g01777 792 ProSiteProfiles PAN/Apple domain profile. 300 383 IPR003609 -
Lapu11g01777 792 ProSiteProfiles Protein kinase domain profile. 475 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01777 792 Gene3D Phosphorylase Kinase; domain 1 436 550 - -
Lapu11g01777 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 189 IPR036426 -
Lapu11g01777 792 ProSiteProfiles Bulb-type lectin domain profile. 32 155 IPR001480 -
Lapu11g01777 792 SMART serkin_6 475 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01777 792 Pfam D-mannose binding lectin 83 187 IPR001480 -
Lapu11g01777 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 551 754 - -
Lapu11g01777 792 Pfam PAN-like domain 321 363 IPR003609 -
Lapu11g01777 792 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 225 785 - -
Lapu11g01777 792 SMART blect_4 32 162 IPR001480 -
Lapu11g01777 792 SUPERFAMILY Protein kinase-like (PK-like) 459 763 IPR011009 -
Lapu11g01777 792 Gene3D - 26 159 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01777 Lapu-Chr11 30477319 30481491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01777 422 765 Receptor kinase-like Gene Family AT3G45860 54.728 2.35e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01777 PK_Tyr_Ser-Thr 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01777 - - vra:106778432 1355.12