Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01776 ATGTCATTTTTCCATAGTCAAAAATTTTTCAAGAGGTTCTGTGTTGATGAATTCCAAATGGCAAGTCTTCCATATAGCAGCTTTCTGTCTAATGATCTCTTGCCATCTCTTGGAGCAAAAATCAACCAAGAAACAAGGCTTAGAAGATGCATAGTTTCCCCTTTTGATCCACGTTATAGGGCATGGGAGATGCTGCTGATTGTGCTTGTTGTTTACTCTGCATGGATTTGCCCCTTTGAGTTTGCCTTTCTGCCTGAGAAACAAGGCACACTATTCATCATAGACAACATTGTCAATGCCTTCTTTGCCATTGACATCGTGCTCACATTCTTTGTGGCATATCTTGATAACCATTCCTACCTTCTTGTTGATGATCCAAAGAAAATTGCATTAAGGTACATATCTACCTGGTTTATCTTTGATGTCTGTTCAACTGCTCCATTCCAATCCATCAGCCTCCTGTTCACTGATCACAGCAGTGAAATTGGGTTCAAAATTCTGAACATGCTTCGGCTGTGGCGCCTGAGACGTGTCAGTTCTCTGTTTGCAAGACTTGAGAAGGACATTCGCTTCAATTACTTCTGGACAAGGTGCTCCAAGCTCATTGCTGTGACATTATTTGCTGTGCACTGTGCTGGGTGCTTCAACTATCTGATAGCAGATAGGTACCCTGATGCCAGATCAACATGGATTGGTTCTGTGTACCCAAATTTCAAAGAAATGAGTCTCTGGGCCAGATATGTCACTGCCATGTACTGGTCCATTGTCACACTAACTACCACTGGCTATGGAGACTTGCATGCTCAAAACACAAGGGAGATGCTCTTTGACATCTTTTACATGTTGTTCAACTTGGGATTAACTTCATACATCATTGGAAACATGACAAACCTAGTTGTCCATTGGACAAGCCGCACCAGAAATTTTAGGGACACAGTGAGAGCAGCTTCAGAATTTGCATCAAGAAACCATCTGCCACATCACATACAGGAACAGATGTTGTCACACTTGTGCTTGAAGTTCAAGACAGAAGGATTGAAGCAAATATATACGAATGATGCAAAGCGAAATTCATGGGGCCAATAA 1086 0.419 MSFFHSQKFFKRFCVDEFQMASLPYSSFLSNDLLPSLGAKINQETRLRRCIVSPFDPRYRAWEMLLIVLVVYSAWICPFEFAFLPEKQGTLFIIDNIVNAFFAIDIVLTFFVAYLDNHSYLLVDDPKKIALRYISTWFIFDVCSTAPFQSISLLFTDHSSEIGFKILNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCSKLIAVTLFAVHCAGCFNYLIADRYPDARSTWIGSVYPNFKEMSLWARYVTAMYWSIVTLTTTGYGDLHAQNTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNHLPHHIQEQMLSHLCLKFKTEGLKQIYTNDAKRNSWGQ* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01776 361 PANTHER POTASSIUM CHANNEL AKT1 26 348 IPR045319 GO:0005249|GO:0006813
Lapu11g01776 361 FunFam Potassium channel KAT3 61 301 - -
Lapu11g01776 361 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lapu11g01776 361 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g01776 361 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g01776 361 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g01776 361 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g01776 361 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g01776 361 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g01776 361 Gene3D - 60 300 - -
Lapu11g01776 361 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01776 Lapu-Chr11 30450353 30456997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01776 1 351 Ion Channels AT5G46240 77.493 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01776 K21867 - gmx:100800340 677.937