Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01773 ATGATGGAACAGTCTAGATTCTACAAACACCTTCAATGCAATACCATGGAACCTAGAAATGAGGAGTTCCAGCCTGGATCTCAATCAGTAATTCAGGACCATATGGATGGCATGCATTCTATTAGACGACCATCTGACTATAGCACATCAGATGTTAAACCGGTTCTTAATTATTCAATACAGACGGGCGAGGAATTTGCTCTTGAATTCATGCGAGATAGGGTGAATCTCAGGAAGCCCATATTTTCAAATGTTAGTGATTCCAATTCCAATTATGCAGCTGGTTGCATGGAACTGAAAGGCGTCTTAGGCATCAGTCATGCAGCTTCTGAGAGTGGATCAGACATTTCTATGCTATCAAAAGCTGAGAAAGGTCCAACAGAGTTTAACAGACAAAGTACATCATTACATGGAGACAGAAGCAATTATGGGTCAATTCGATCAATACCAAGAGTTTCATTGAATCAGGAGAATAGTCGGTTTGTACGTGGGTATGGCTCTTCTGTTGGTTCTGACAGCTCACCAATGATGAAGTGTCTTTGTAGCTTTGGTGGCAGAATATTACCACGACCAAGTGATGGGAAGCTAAGGTATGTTGGAGGTCAAACTCGTATTCTTCGACTAAGAAAGGACATATCTTGGCAGGAGCTTATGCAAAAAGCATTGTTAATCTATAATCTGGTTCATGTACTGAAATATCAACTTCCTGGGGAAGATCTCGATGCTTTGGTATCAGTATCGTCTGATGAGGATTTACAGAATATGATGGAGGAATGTAATCTTCTAGAAGATAGAGAGCGCTCAAAAAAGCTTAGGCTGTTTTTGTTCTCAATGAGTGATTTGGAAGATGCTCAATTTACTCTTAGCAGCATTAGTGATGACTCTGAGGTCCAATATGTTGTTGCTGTTAATGGCATGGACTTTGGATCACTAAACAGCTCAACCCCACTTGGTGTCAGTTTTTCAGCAGATGATCTGCATGAATTGGAAAGGCAAACTTCACAGAGAGAGACTAATAGAGCTGTAGAATCTATAGGTGCCAGCAATGCTCCCTTGACTAACAAATCTGATCCTTCATTGACTATTCATTCTTCACAAGCAGTTCTACCAAATGCCTCAAATTCTTATGAGATTGATCAACTATCTTATGGTGATCAAATGGCTCAAGTTGGGGAATATAGTCGTCAATATTTTGTTCACCATGGCCTTAATTCCACTCATAACCCTGTTGGAGAGAATCCTATTCCTGTAGCTCCTCATCTGCTTAACAATCAACAAGGGGTTCAGATTGAAGACCATCTATCTAGTGGATTACAAATTCAAAATTCTCAGTTATCTGCAATGCAGGTGAAAAAGATAGGTGATAATTCAGTTAAGCAAGGGAGTGACTCTGAAAAAGTTTTATCCTCAGAAACCACGCCTCCAGCTCCCTTACAAACCTCTGATAGTTGCTTAAAAAGTAATTTTCCTGAAGCATCGGTTGTAGTTACCATGGCTGAGGGACATCTACCTTCATTGCCTTCAACAAAAAAGGTTCAGCACAAGGATTATGAAGAGTTCTCTTCTACTTCTAGCAGCGCATTTGTTCCTGCTTATGTTGATTCCCATGCCAATGCAATTGATTTGAGTTGTCTTCATCCTCCTCCACTTCCTGAAAGAGTTTATTATTCAGAAAGAACTCCAAGGGAGCAAGTAGAGTTGCTGAATCGTTCCTCAAAGTCAGATGACACACACAGTTCTCAAATTCATGTGTCAGATTTACTTTCTGATGTCAACCCAGAGGACCCAGTAACAGGATCTGGGGACAACGTGCATCCAACTGATGAATTAGGTAATGCAGAAAAGCTCTTGCATGCTGATGGCCATACCACTGACAATGGGTTTTCCAAAAATCAAATGAGCAAACCGTTGCCTGATACAAACAGTCTGACTAAGTCAAAGCTATTTGAGCACACAGACCCTGAGTTGAAGTCAGTGTTGTCAAGCAATGAAGGAACTAAAGATGTTGAAACTGAAAACTATCGTAAAGATAGCCAAACCAAGCCCTTGCTTGATGAAACTGAAATGAAGACCAAAACCAAAGATGGTAAATCAGATCTTCCTGCTTTGCATCATGTTTCCTCTGCTAAGCGTCTTGATGATCTAGCATCCAATCTTCCGGATATTGATTGGGGGGAAGCCTCAGGGAAGGAATCTAATGATGGTTGTATGGTACAAGAACTACCTGTACCTGTAACTGGGAACGTAACTAAAGATGTTTATCAAGATTTCCCCCAAAATGTTGTTTCTAAACAATCTCAAGGGGACATTCTTATTGATATTGATGATCGATTTCCCCGGGAATTGCTTTCAGATATGTTTTCTAAAGCATTACACGGAGAAGATCCCTCCAGTCTGCATCCACTGTCTGGAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAACCCAAAAGATGGTCATATTTTCATAAATTAGCACAAGGGCTTGATAATGTCTCTCTTATTGATCAGGATCATCTTGGTTTTTCACCCGTGATAGGAAAAGCAGAAGATAATAGAACTCATCATGGTTTGGCGCTAACAACTGATGGAGATCCCCTACATCATGAAGATTCCCATATAAATTTTAATGAAGAAAATCCAGAGGACATGCACATAAGGATTGAAACTGAAACTACCGTTCTGAAGTCTAATTATAATCAATCCCAACTTAAGGACAATGAGAGTATGCAGTTTGATGCTATGATGGAAAATCTAAGAATGCCAGGGTCAGAGTTTGAGGATGGCAAATTTGATGTAAAAAATAGCAACCTTCCTCCACCCCTTGATCCTTCTTTTGGAGATATTGACATTAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGCTGCGAGAACTAGGTTCTGGTACCTTTGGGACCGTATATCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACGGGTCGGTCATCTGAACAAGAGAGATTGACTGTAGAGTTTTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGTGGTACAATGGCCACTGTGGCAGAATATATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCTGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAGCGAAATACTTTGGTTACTGGTGGTGTGCGTGGGACACTACCTTGGATGGCACCAGAGCTTCTGAATGGCAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATTGTGTTATGGGAAATTCTTACTGGTGAGGAGCCGTATGCCAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAACACATTAAGGCCAACCATCCCAGGCAACTGTGATGCTGAATGGAGAACACTAATGGAACAATGTTGGGCTCCCAATCCTGCAGTCAGACCATCCTTCACAGAAATAGCTAGTCGTTTGCGCATAATGTCTGCAGCAGCAAGCCAAACCAAAACACAGGGCCATAAAACTTCTAAATGA 3741 0.4066 MMEQSRFYKHLQCNTMEPRNEEFQPGSQSVIQDHMDGMHSIRRPSDYSTSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPIFSNVSDSNSNYAAGCMELKGVLGISHAASESGSDISMLSKAEKGPTEFNRQSTSLHGDRSNYGSIRSIPRVSLNQENSRFVRGYGSSVGSDSSPMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISWQELMQKALLIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNLLEDRERSKKLRLFLFSMSDLEDAQFTLSSISDDSEVQYVVAVNGMDFGSLNSSTPLGVSFSADDLHELERQTSQRETNRAVESIGASNAPLTNKSDPSLTIHSSQAVLPNASNSYEIDQLSYGDQMAQVGEYSRQYFVHHGLNSTHNPVGENPIPVAPHLLNNQQGVQIEDHLSSGLQIQNSQLSAMQVKKIGDNSVKQGSDSEKVLSSETTPPAPLQTSDSCLKSNFPEASVVVTMAEGHLPSLPSTKKVQHKDYEEFSSTSSSAFVPAYVDSHANAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHSSQIHVSDLLSDVNPEDPVTGSGDNVHPTDELGNAEKLLHADGHTTDNGFSKNQMSKPLPDTNSLTKSKLFEHTDPELKSVLSSNEGTKDVETENYRKDSQTKPLLDETEMKTKTKDGKSDLPALHHVSSAKRLDDLASNLPDIDWGEASGKESNDGCMVQELPVPVTGNVTKDVYQDFPQNVVSKQSQGDILIDIDDRFPRELLSDMFSKALHGEDPSSLHPLSGDGVGLSINMENHEPKRWSYFHKLAQGLDNVSLIDQDHLGFSPVIGKAEDNRTHHGLALTTDGDPLHHEDSHINFNEENPEDMHIRIETETTVLKSNYNQSQLKDNESMQFDAMMENLRMPGSEFEDGKFDVKNSNLPPPLDPSFGDIDISTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGNCDAEWRTLMEQCWAPNPAVRPSFTEIASRLRIMSAAASQTKTQGHKTSK* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01773 1246 ProSitePatterns Protein kinases ATP-binding region signature. 970 995 IPR017441 GO:0005524
Lapu11g01773 1246 MobiDBLite consensus disorder prediction 566 644 - -
Lapu11g01773 1246 MobiDBLite consensus disorder prediction 338 359 - -
Lapu11g01773 1246 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 196 278 - -
Lapu11g01773 1246 Pfam Protein tyrosine and serine/threonine kinase 965 1227 IPR001245 GO:0004672|GO:0006468
Lapu11g01773 1246 MobiDBLite consensus disorder prediction 658 700 - -
Lapu11g01773 1246 PANTHER SERINE-THREONINE PROTEIN KINASE 221 1228 - -
Lapu11g01773 1246 Gene3D Phosphorylase Kinase; domain 1 957 1051 - -
Lapu11g01773 1246 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1052 1244 - -
Lapu11g01773 1246 Pfam PB1 domain 193 276 IPR000270 GO:0005515
Lapu11g01773 1246 SUPERFAMILY CAD & PB1 domains 192 281 - -
Lapu11g01773 1246 MobiDBLite consensus disorder prediction 331 359 - -
Lapu11g01773 1246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1089 1101 IPR008271 GO:0004672|GO:0006468
Lapu11g01773 1246 MobiDBLite consensus disorder prediction 566 580 - -
Lapu11g01773 1246 Gene3D Transferase(Phosphotransferase) domain 1 1052 1246 - -
Lapu11g01773 1246 ProSiteProfiles Protein kinase domain profile. 964 1229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01773 1246 SMART serkin_6 964 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01773 1246 CDD STKc_MAP3K-like 970 1227 - -
Lapu11g01773 1246 CDD PB1_UP2 180 276 - -
Lapu11g01773 1246 SUPERFAMILY Protein kinase-like (PK-like) 953 1227 IPR011009 -
Lapu11g01773 1246 MobiDBLite consensus disorder prediction 624 644 - -
Lapu11g01773 1246 SMART PB1_new 191 278 IPR000270 GO:0005515
Lapu11g01773 1246 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 957 1051 - -
Lapu11g01773 1246 MobiDBLite consensus disorder prediction 455 483 - -
Lapu11g01773 1246 MobiDBLite consensus disorder prediction 668 700 - -
Lapu11g01773 1246 PRINTS Tyrosine kinase catalytic domain signature 1046 1059 IPR001245 GO:0004672|GO:0006468
Lapu11g01773 1246 PRINTS Tyrosine kinase catalytic domain signature 1198 1220 IPR001245 GO:0004672|GO:0006468
Lapu11g01773 1246 PRINTS Tyrosine kinase catalytic domain signature 1083 1101 IPR001245 GO:0004672|GO:0006468
Lapu11g01773 1246 PRINTS Tyrosine kinase catalytic domain signature 1154 1176 IPR001245 GO:0004672|GO:0006468
Lapu11g01773 1246 Gene3D - 195 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01773 Lapu-Chr11 30299210 30311598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01773 50 597 MAP Kinase Kinase Kinase AT1G16270 36.656 3.15e-83 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lapu11g01773 PK_Tyr_Ser-Thr 8.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01773 - - gmx:100817937 2142.47