Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01771 ATGGAAGACGTAAACTGGTACCACGAGTTTGCCATCAGAAGGTATTGTCCTGCAAGAATGGAGCAAGAGCAAGGGGGAGAGTGCCAAGATCAAGAGGGAGTAGTTTTTTATGATACTGAATTATGTTTTTCTGATGCCACCTGCAGCAGTCCTTGTTTGGCTTCATCAGAGGTTGATGACTTTGTTGATAGCTTCTTCAACATGGATCAGTATGAGTATGAGAAAGGAGATAAAGGGTCACAAGAGAAGCATCAAAGTTTTGGCCACTTCGTGGTGAATGATGATGATGAGGATGAGGCTGATGCATACTCCTCAGTGAATGGTGTCTTTGGATACCTTCCAACCACCATGGAGGATTCAGAATTGGAGATGTATGAAAATTTCACAACATCTATGTTGGAGGAAGAGGTTGTAATGAGTGGCTCTTTTGGTGCTATACCTGAGTTTGTGCATTTTGCACAAGAGGCCAACCTTGGTGTGGACCAAGGGTTAGACTTGGTTCACATGCTGCTGGCATGTGCTGAAGCTGTGGGGTGTAAGGACAACCAGCAAGCAGAGTTGCTGATTAGCAGAATTTGGGCTTTGGCAAGCCCTTCAGGAGATGCACTACAGCGAGTTTCCTACTGTTTTGCCACAGGATTGAAGTGTAGGTTGTCACTTCTTCCCTATAATGTCATTGCAAATGGTGCACTCACAAGTACTTCCATGGATAATATACCTTTGATCAATAGGGAGAATAAGCTGGAAGGGTTTCAACTTCTTTACCAAACCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATGCCAAGCATCACAGGGAAAGAGCTCAATACACATTGTTGATTTAGGAATGGAGCATACCCTTCAGTGGTCTTCCCTCATAAGGGCCTTTGCTTCAAGACCTGAGGGCCCTCCAGTGCTCCGGATCACAGGATTAACTGACAAGGAAGACAACTCCAAACTTCAAATTAGCATGAATGTGCTTGTGGAGGAAGCAAACAACTTGGGAATGCATCTTGAATTCCAGACAATTTCTGAACCTGTAACTCCATCTCTTCTTACTGTGGAGAAGCTGAACTTGAGAAAAGGTGAAGCTTTGTTTGTTAATAGTATCTTGCAGTTGCACAAATATGTCAAAGAAAGTAGAGGCTATCTGAAGGAAATTCTGCTATCAGTAAAGAAGTTAGGTCCAAGTGCTCTTACAGTGGTAGAGCAAGACACAAACCATAATGGTCCTTTCTTCCTTGGGAGATTTTTGGAATCTCTTCACTATTACTCAGCCATATTTGATTCTCTTGAGGCATGTATGCCAAGAAATAGCCAACACAGGATGAAGATAGAGAGATTACACTTTGCAGAGGAAATTCGGAATGTTGTAGCTTATGAGGGTCCTGATAGAATAGAAAGACATGAAAGGGTAGACCAATGGAGAAGGCAATTAGGCCGAGCAGGATTTCAGGTGATGCCACTGAAGTGCACAAGTCAAGTTAGAATGATGCTTTCTGTTTATGACTGTGATGGATACACATTGTCCAGTGAGAAGGGAAACCTTCTACTTGGATGGAAAGGAAGGCCAGTGATGATGTCTTCTGCATGGCAAGTGGCAACTCTGTGA 1629 0.4328 MEDVNWYHEFAIRRYCPARMEQEQGGECQDQEGVVFYDTELCFSDATCSSPCLASSEVDDFVDSFFNMDQYEYEKGDKGSQEKHQSFGHFVVNDDDEDEADAYSSVNGVFGYLPTTMEDSELEMYENFTTSMLEEEVVMSGSFGAIPEFVHFAQEANLGVDQGLDLVHMLLACAEAVGCKDNQQAELLISRIWALASPSGDALQRVSYCFATGLKCRLSLLPYNVIANGALTSTSMDNIPLINRENKLEGFQLLYQTTPYIAFGFMAANEAICQASQGKSSIHIVDLGMEHTLQWSSLIRAFASRPEGPPVLRITGLTDKEDNSKLQISMNVLVEEANNLGMHLEFQTISEPVTPSLLTVEKLNLRKGEALFVNSILQLHKYVKESRGYLKEILLSVKKLGPSALTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSQHRMKIERLHFAEEIRNVVAYEGPDRIERHERVDQWRRQLGRAGFQVMPLKCTSQVRMMLSVYDCDGYTLSSEKGNLLLGWKGRPVMMSSAWQVATL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01771 542 ProSiteProfiles GRAS family profile. 157 538 IPR005202 -
Lapu11g01771 542 Pfam GRAS domain family 166 538 IPR005202 -
Lapu11g01771 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 533 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01771 Lapu-Chr11 30271353 30273020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01771 161 539 GRAS Transcription Factor Family AT1G66350 38.205 1.64e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g01771 GRAS 7.6e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01771 - - gmx:100814931 898.271