Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01764 ATGTTCGATGGAATCGGACAAGGCTCTTGCCAAGATGTACCTGCAGAGGGAGATTTGCAACGTGTGTGCTGTGAAGGACCAATGCAACTAGAGCGCTATGAGTCGCTGGCAAAGTGGAGTGAGCGGTTCGGTAAAGCTGGCTTCAGGTCCTTACATTTAGACTCCAACGCTTACAAACAAGGCAGACCTGGTGTTCTAAAATTCACAGTGATTAGCCTAAAAAGGAGCAAAGCTCAATGA 240 0.475 MFDGIGQGSCQDVPAEGDLQRVCCEGPMQLERYESLAKWSERFGKAGFRSLHLDSNAYKQGRPGVLKFTVISLKRSKAQ* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01764 79 Pfam GRAS domain family 22 62 IPR005202 -
Lapu11g01764 79 ProSiteProfiles GRAS family profile. 1 79 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01764 Lapu-Chr11 29900490 29901620 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01764 22 61 GRAS Transcription Factor Family AT1G14920 52.500 1.56e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g01764 GRAS 3.6e-08 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01764 K14494 - gmx:100785293 67.781