Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01753 TTTCCGTCTTTTTTTTCTTTTCCCTTCACTGCTTCGACTTGCACACACGGTGAATTCACTCCTCTCTCTTTCTCTCTCATTTTTCCCTTCACTGCTTCCCTTCACTGCTTTGACGTGCACACACATTTGCAGTTGAAGTCCCTCACCGTTAAAGTCTCGCACGGCCTCCTCTGTCTCGTCGTCGCCAAAAACGACGTCGTTCTCTTCCTCGCCCCCAACGATATCCGCTACATCGTCTGCTTCCTCGCCGTCACTTTCCTCGGCGTTGCCGTCACTACCGTCAATCCCACCTACACCACCGCCGAGGTCGCCAAACAGGCCAAAGACTCCAATCCCAAACTTGTCGTCACTGTCCCCGAACTGTGGGACAAGCTCCAACACCTCAACCTTCCCGCAGTGTTCCTACACTCCCATGTGCCCTCCCACGCGACTAGCTTTGACGCGCTAGTCCAACTCGCAGGGTCGCCGACCGAGTTTCCGAAGGTTGACGTCAAGCAGAGTGACACGGCGGCGCTGCTGTACTCCTCCGGGACCACGGGACTGAGCAAGGGCATGGTTCTCACGCACGGGAACTTCGTGGCGGCGTCGTTGATGATGGGATTGGACGATGATTTGGCCGGGGAGATGCATAGCGTGTTCCTCTGCGTTCTGCCGATGTTTCATGTGTTTGGTTTGACGGTGATTTCGTACGCCCAGCTTCAGTGGGGCAGTGCTGTGGTGTCTCTGAAGAAGTTTGAGTTTGAATTGGTTTTGAAGACGATTGAGAAGTATAGGGTGACTCATTTGTGGGTTGTGCCTCCGATTATTCTTGCTTTGGCCAAACATGGTTTGGTCGATAAGTATGATCTTTCCTCGCTGAAGCATATTGGTTCTGGTGCTGCTCCTCTTGGGAAAGAGTTGATGGAGGAGTGTGCTAAACGTTTCCCTCGTGCCACTGTTTCTCAGGTAGAAGACAATGTTTGTAGCCAGTGA 972 0.5278 FPSFFSFPFTASTCTHGEFTPLSFSLIFPFTASLHCFDVHTHLQLKSLTVKVSHGLLCLVVAKNDVVLFLAPNDIRYIVCFLAVTFLGVAVTTVNPTYTTAEVAKQAKDSNPKLVVTVPELWDKLQHLNLPAVFLHSHVPSHATSFDALVQLAGSPTEFPKVDVKQSDTAALLYSSGTTGLSKGMVLTHGNFVAASLMMGLDDDLAGEMHSVFLCVLPMFHVFGLTVISYAQLQWGSAVVSLKKFEFELVLKTIEKYRVTHLWVVPPIILALAKHGLVDKYDLSSLKHIGSGAAPLGKELMEECAKRFPRATVSQVEDNVCSQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01753 323 Gene3D - 41 315 - -
Lapu11g01753 323 Gene3D - 42 188 - -
Lapu11g01753 323 Pfam AMP-binding enzyme 41 314 IPR000873 -
Lapu11g01753 323 ProSitePatterns Putative AMP-binding domain signature. 172 183 IPR020845 -
Lapu11g01753 323 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 40 311 - -
Lapu11g01753 323 SUPERFAMILY Acetyl-CoA synthetase-like 38 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01753 Lapu-Chr11 29217425 29218570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01753 38 315 Monolignol Biosynthesis Gene Families AT4G05160 58.392 4.16e-114 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01753 K01904 - gmx:100797843 450.284