Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01720 ATGAGTGAAGAACATAGAAATCTTGCGTGTGTGTTGTGTAGGTATCAACATAAACGTCACGATGGTAGTTGTCAATTTGGTCAGTATTTTCCCAGTAACAAGTCAATAGACTTTGAGATTGCTTGTAGGCTTTTTGGTTTGGCCAATTTGCTTAGATTGATGCGTTGTGCTGAACCATCTGAAAGACAAGCCATGGCTGATTCCATTTTGAGAGAGGCTAAGATGTGGGATAATGATCCCATTCATGGTGCCTTAGGTCATGTAATTACTCTGAACTCTCAGATCCAATCTCTTGAAACACAGTTAGAACTTGTAAACACCATGCTTGCTCAATGCTCACATCAATCAACTTCACAAATTGCAAACACTGCTATGGATGTTCTTGCTTGTTCTTCTAACTCAGGACAATCAAGTACTGTTGTTCTATCTCAGGAGAAAGATGGTGCTGGTCAAGAGAAAGATGCTGAGATTCAAAAGAAAAAATGA 486 0.393 MSEEHRNLACVLCRYQHKRHDGSCQFGQYFPSNKSIDFEIACRLFGLANLLRLMRCAEPSERQAMADSILREAKMWDNDPIHGALGHVITLNSQIQSLETQLELVNTMLAQCSHQSTSQIANTAMDVLACSSNSGQSSTVVLSQEKDGAGQEKDAEIQKKK* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01720 161 MobiDBLite consensus disorder prediction 147 161 - -
Lapu11g01720 161 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Lapu11g01720 161 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Lapu11g01720 161 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 137 - -
Lapu11g01720 161 MobiDBLite consensus disorder prediction 140 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01720 Lapu-Chr11 28100920 28101583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01720 9 109 AS2 family AT2G19820 36.275 2.32e-17 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu11g01720 LOB 5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01720 - - pvu:PHAVU_011G178700g 209.92