Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01717 ATGGTTTCTCTCACGGGAAAATCCAGACTGGGCTCAACTCGAGCCTCTGTTGTCGGTGCTGCCCAATCTCGCCCAAGCGTGGGTGGTAGGAATTTCAAGGTGTTTTCGGAAATTGACAGGACTAAAGCTGGTGATGGGAATACGACCTCTGCAAGAGGAACAGGTGCAAATTCAAGGAGTACTGTGGTAGCTAGCAAAGGGGTTATTCTTAATAGTTCCAGTAATCTTAAGGGTGGTCTCAAAAAGAGTATGGATAAAAGTAGTAGCAAATATGGTACTTCTTCCGTGAGAAAGGCATTGGCTGATGTTAGCAATGTTCAAGAAAAATTCACAGCAGCTGTTGGGCATGCTAACTCAAAAAAGAAGGTTTCAGCAGGTTCAAGTACCAAAAAAGTGGGTGTATCTTTGAGGAAGTCCGTCACGGGAAGAGTGCAGAGAAATACAAGTAAAGCTGATGTTCAGTTAGATGCTCTCAATAGAGATGATCAGAAGAATAATACAAAAGGAGGCCAATCTGTTTTTTCAACAAAGGACAGGTTTACATGGAAGCCTACAGCTACAAGCACTTCAAGGAAGTCTTTACCAGTACCGAGGAGGGTAATCAGAGAAGATACGAGTAAAACAAAGGAAAACGTCAGAAGTTCTCAAACTGCAAGTTCAAGGAAGTCTTTACCAGTGCCGAGGAGGGTAATCAGAGAAGATACGAGTAAAACAAATGACAATGTTAGAAGTTCTCAAACTGCAAAAGGCCAATGCGGTCTTCCCGCTAAGGCAACAACAAGCAGAAGGGATAGTTCCCAACTGATTAATGGAAGAAGCCATCTATGGAAGAATCGAGTGAGTGATGGCTTTGTTCTAACGGTTCAGTCTAATGTTTCACATGCATCCTCAAGGAAGTCTGCCAAGCCAATTGTTAAGACCATACTCAAGGCTTCCATTGCACAGAGGACTTTAAAATCTAAATCCATATCATCTCAGAGTAAATTAGAATCAACTATTGCAAAGTCATCTCAGAACAAACCCATATCCGCTCAAAAAGAATCAACTAGTGCAACCTTATCTCAGGAAAAAGAAACAGTTTCGTTGTCTCTTCCTGGGAATGGTTCAACAGTTTCTGATGAAGCAAATCAAAGACATCCTTCATCTGGAGAGAGTACAGATTTGTCAGAGTTTATTCCAAGGAAAAAATCCAGCCGCCGGAAATCATATACAACTTCATTAATTGAAGGATCTAAGTTTCTGAAGGAAAGTGAAGTTAGAGAGCAAGATAACCTACCCAACATAGATAATAAATATAATCAATTTGAAGTTTCTGAATACATTGATGACATATACCGGTACTATTGGGTTACTGAGGCACATAATCCAGCTCTAGCAAATTATATGTCAATTCAGACGGACATTACACCTCATTTGCGGGGCATTTTGATTAACTGGCTAATTGAAGTACACTTCAAATTTGATTTGATGCCAGAAACACTGTATCTCACTGTTATGTTGCTGGATCAATATCTCTCCCTGGTGACTATCAAAAAGACTGATATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAGTATGAGGATTTTTGGCATCCTAGGATTAAAGATTTAATTAGCATATCTGCTGGGTATACTAGAGATCAAATGCTTGGAATGGAAAAACTTATTCTTAGAAAATTAAAGTTCCGCCTCAACACACCTACTCCTTATGTGTTTTTGGTGCGGTTTCTGAAGGCTGGACAATCGAATAAAAAGATTGAACACTTGTCATTCTTTCTGGTTGACTTGTGCTTAGTTGAATATGACGCTTTAGCATTCAAGGCTTCATTGCTTTGTGCATCAGCTCTCTATGTTGCACGGTGTACTTTACAAATATCTCCACCGTGGACCCCATTACTTCATAAGCATGCACGTTATGAAGTTTCACAGCTCAGGAATTGTGCGGAAATGATACTGAAGTTCCACAAAGCTGCTGGGGTTGGAAAGTTGACAGTTGCATATGAAAAATACTCTAGACAAGAACTCGGTAGGGTTGCAGCAGTGAAACCGTTGGACGTACTTCCCCTGTGA 2079 0.4055 MVSLTGKSRLGSTRASVVGAAQSRPSVGGRNFKVFSEIDRTKAGDGNTTSARGTGANSRSTVVASKGVILNSSSNLKGGLKKSMDKSSSKYGTSSVRKALADVSNVQEKFTAAVGHANSKKKVSAGSSTKKVGVSLRKSVTGRVQRNTSKADVQLDALNRDDQKNNTKGGQSVFSTKDRFTWKPTATSTSRKSLPVPRRVIREDTSKTKENVRSSQTASSRKSLPVPRRVIREDTSKTNDNVRSSQTAKGQCGLPAKATTSRRDSSQLINGRSHLWKNRVSDGFVLTVQSNVSHASSRKSAKPIVKTILKASIAQRTLKSKSISSQSKLESTIAKSSQNKPISAQKESTSATLSQEKETVSLSLPGNGSTVSDEANQRHPSSGESTDLSEFIPRKKSSRRKSYTTSLIEGSKFLKESEVREQDNLPNIDNKYNQFEVSEYIDDIYRYYWVTEAHNPALANYMSIQTDITPHLRGILINWLIEVHFKFDLMPETLYLTVMLLDQYLSLVTIKKTDMQLVGLTALLLASKYEDFWHPRIKDLISISAGYTRDQMLGMEKLILRKLKFRLNTPTPYVFLVRFLKAGQSNKKIEHLSFFLVDLCLVEYDALAFKASLLCASALYVARCTLQISPPWTPLLHKHARYEVSQLRNCAEMILKFHKAAGVGKLTVAYEKYSRQELGRVAAVKPLDVLPL* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01717 692 MobiDBLite consensus disorder prediction 319 397 - -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 134 266 - -
Lapu11g01717 692 PANTHER CYCLINS 382 674 IPR039361 -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 1 20 - -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 164 194 - -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 42 59 - -
Lapu11g01717 692 SUPERFAMILY Cyclin-like 433 568 IPR036915 -
Lapu11g01717 692 SMART cyclin_7 478 561 IPR013763 -
Lapu11g01717 692 SMART cyclin_7 574 656 IPR013763 -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 38 59 - -
Lapu11g01717 692 SUPERFAMILY Cyclin-like 570 689 IPR036915 -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 74 93 - -
Lapu11g01717 692 Gene3D - 458 562 - -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 240 266 - -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 196 210 - -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 134 154 - -
Lapu11g01717 692 SMART Cyclin_C_2 570 687 IPR004367 -
Lapu11g01717 692 Pfam Cyclin, N-terminal domain 443 568 IPR006671 -
Lapu11g01717 692 FunFam putative cyclin-B3-1 isoform X3 566 691 - -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 319 388 - -
Lapu11g01717 692 FunFam Cyclin N-terminal domain containing 2 458 565 - -
Lapu11g01717 692 Pfam Cyclin, C-terminal domain 570 685 IPR004367 -
Lapu11g01717 692 CDD CYCLIN_CCNB1-like_rpt1 437 565 - -
Lapu11g01717 692 MobiDBLite consensus disorder prediction 1 25 - -
Lapu11g01717 692 Gene3D - 563 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01717 Lapu-Chr11 28036056 28047369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01717 27 692 Core Cell Cycle Gene Families AT1G16330 41.667 6.85e-154 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01717 K21777 - gmx:100808850 956.051