Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01699 ATGGAAAGAATGTTCCCTCCTAAGAAGCCTTCAACTATGAATTCCCATGACAGATCCATGTGTGTTCAAGGTGACTCAGGCCTTGTCCTCACCACAGACCCTAAGCCACGTCTTCGTTGGACTGTTGAACTGCATGAACGTTTTGTTGATGCTGTTGCTCAGCTTGGAGGACCTGATAAGGCCACTCCTAAGACAATTATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCACCTTCAGAAATTCAGGCTTGGAAAGCAGCCCCACAAGGATTTCAATGAACACTCTATTAAGGATGGCATGAGAACTTCTGCTTTAGAACTTCAACGAAACATTGGCTCCTCTTCTGCCATGATTGGTCGCAACATGAACGAGATGCAAATGGAAGTGCAGAGAAGATTGCATGAACAACTAGAGGTTCAGAAAAACCTTCAGCTGAGGATTGAGGCTCAAGGAAAATACATGCAAAGTATATTGGAGAAGGCTTATCACACACTTGCTGGTGAAAACATGGCACCAAACATGAAGGGTATGGGAGCAGCTCAAGGAAGCACTGACATGGGGGTGATGAAAGAATTTTGTTCTCTGAATTACCCTTCTTTTCAAGATCTTAACTTGTATGGTGGTAGTGGTGACCAACTTGAAGGGTTTATGGCATCATCAAATAGTGAGAATATGTTTGAGGGGAAGAAGAGGCTTTGCCCTTACAGTGGAAGTGGGAAGAGTCCATTGATTTGGAGTGATGATCTCAGGCTTCAAGATTTGGGAACAGCTTCATCATGCATTAGCCCTCAAGAGGACCCTTTCAAAGGTGATCACAAGGTTCAGATTTCACCACCATCAATGGATAGTGATCCCATGTCAGAGATCTATGACACAAAACCAGTGGTACTCCATGGAGAAACTGTAGGTAATAACAATCACAACAAATTTGATGCTTCTATGAAGCTAGAGAGGGCATCACCACAAAGATCACCACTTCAACCAGAAAGGAATAGTCCTATGATCAATGCTAGTTCCTTGGCACAAGGGTTTTGA 1053 0.4387 MERMFPPKKPSTMNSHDRSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNEHSIKDGMRTSALELQRNIGSSSAMIGRNMNEMQMEVQRRLHEQLEVQKNLQLRIEAQGKYMQSILEKAYHTLAGENMAPNMKGMGAAQGSTDMGVMKEFCSLNYPSFQDLNLYGGSGDQLEGFMASSNSENMFEGKKRLCPYSGSGKSPLIWSDDLRLQDLGTASSCISPQEDPFKGDHKVQISPPSMDSDPMSEIYDTKPVVLHGETVGNNNHNKFDASMKLERASPQRSPLQPERNSPMINASSLAQGF* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01699 350 MobiDBLite consensus disorder prediction 322 350 - -
Lapu11g01699 350 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Lapu11g01699 350 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Lapu11g01699 350 Gene3D - 34 92 - -
Lapu11g01699 350 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 227 IPR044848 GO:0003700
Lapu11g01699 350 FunFam Myb family transcription factor 34 92 - -
Lapu11g01699 350 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Lapu11g01699 350 MobiDBLite consensus disorder prediction 330 350 - -
Lapu11g01699 350 Pfam MYB-CC type transfactor, LHEQLE motif 131 169 IPR025756 -
Lapu11g01699 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01699 Lapu-Chr11 27368114 27372213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01699 4 349 G2-like Transcription Factor Family AT1G79430 55.467 1.14e-117 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu11g01699 Myb_DNA-binding 4.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01699 - - gmx:100796268 614.379