Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01684 ATGGGATGTTGGTCACATGATTTGGCTTTCGCACTCGTTGCTGTCTTGTTCTGTCTCTTCAGTTGCTTGGTTAGCTTTTCACAAGCTCAATCTACAAACGCTACCACTGATCCTTCTGAAGCAAGTACTTTAAACTCAATCTTCAGCAAATGGGAAATATCTGCAGACACAACTCAGTGGAATATAAGCGGTGAATTATGCAGTGGAAGTGCCATCGATAGTACCATCACCATTGATACTCAAAGTCACAACCCATTCATCAAATGTGACTGTTCCTTTCTCAATAGAACTACTTGCCGCATCACAGCACTGAAGGTCTATGCACTGAACGTGCTTGGTGAAATTCCAGAAGAACTAGGGACTCTCACTTATCTCACCAATTTAAATATTGGGCAAAATTACTTGACGGGTTCTCTACCTTCAACTATTGGAAATCTAACTCGTATGCAATACTTGAGCCTTGGAATCAATAATTTATCAGGGGAGCTTCCAGAGGAATTGGGAAATCTTACAGAGTTACTATCACTGAGTTTTTCGTCAAACAACTTTTCAGGATCTCTCCCATCTGAACTTGGGAAACTCACGAAATTAACACAACTCTACTTTGATAGTTCTGGAATTAGTGGTCCAATTCCGTCCTCATTTGCAAACCTTAGAAGTTTGGCAACCGTATACGCTTCAGACACGGAACTCACAGGCAATATTCCAGACTTCATAGGAAATTGGACCAGTCTCCAAGTCTTGAGGTTTCAAGGCAATTCTTTCAATGGGTCAATACCCTCATCATTTTCTAATTTGTCTTCTTTAACAGAATTGAGAATAAGTGGTTTATCTAATGGGAGCTCCTCTCTGGAATTTGTACAGAATATGAAATCTTTGATTACCTTAGAATTGAGAAATAACAATATTTCTGGTTCAATTCCATCCTCGATTGGAGAGTTGCACAATTTGACCCAGCTGGATTTAAGCTTCAATAACATTGAAGGACAGATTCCGGGATCACTTTTCAATTTGAGTTCGCTCTCTGCCTTGTTTCTTGGAAATAATAAACTAAATGGCACCCTTCCGACGGAGAAAAGTTCGTCGTCACTTCAATATATAGACTTGTCATACAATGATCTATCGGGTAGCCTCCCCTCTTGGGTAAATGAAGCAAATTTACAAGTGAATTTAGTTGCTAACAACTTGTCAATAGATGATGCTTCAGATACCAGTGGCTTGCCAACTGGGCTCAACTGTCTCCAGAAAAATTTTCCTTGCAATCGAGGTGCTGGAAGATATTCTGACTTTGCAATCAAGTGTGGCGGTCCCCAAGTTAGGTCAACAGATGGAACTGTATATGAAATGGAGAATGAGACACTTGGTCCTGCTACATACTTTGTTACTGATACAAGTAGATGGGCTGTTAGTAATGTTGGATTATTTACGGGGAGTAGTAATCCAGTATTCACAAGATTTGTGTCTAATCAATTCACTAACACTATGAATACGGAGCTCTTCCAAACAGCACGGCTCTCTCCTTCATCATTAAGATATTATGGCTTGGGGCTGGAAAATGGCTTTTACAACATCACCCTTCAATTTGCAGAAACTGCTATTCTGGATTCTGCTACAACATGGGAAAGCCTTGGGAGACGAGTCTTTGATATATATATTCAGGGGAATCTTGTTTTGAAAGATTTTGACATACAAAAGGAAGCTGGGGGAATCTCATACAGAGCTGTCCAAAAGCAATTTAGGTTTGAAGTGTCGGAAAACTATCTTGACATCCATCTCTTTTGGGCTGGAAAGGGGACTTGTTGCATACCAGCTCAAGGTACTTATGGGCCCTTGATTCAAGCCATCCATGCTATCCCAGATTTTATTCCTACTGTCAGTAACGAACCTCCAAGCAGTAAAAGTAATAGAACCGGCCTAATTGTTGGAATTGTTATTGGAGTTGGAGTTTTAAGCTTTTTATCAGTTTTTGTGATTTTCTGTATCATTCGGAGAAGAAAACGCCAGCATGAGGATGAAGAGCTTTTAGGAATTGATACAAAGCCATACACTTTCAGTTATTCTGAGCTGAAGAATGCTACAAATGACTTTAATCTCGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAGTGATGGAAGAGTTATTGCTGTGAAACAACTGTCAGTAGCATCCCATCAAGGAAAGAGCCAGTTCATAACTGAGATTGCTACTATATCAGCTGTACAACATCGTAATCTGGTCAAACTATATGGATGTTGCATTGAGGGAAATAAAAAACTTCTTGTGTACGAGTATCTAGAGAATAAGAGTCTTGATCAAGGATTATTTGGAAATTCTATAACCCTCAACTGGTCTACACGCTATGATATCTGCTTGGGTGTTGCCAGAGGTTTAGCTTATTTACATGAAGAGTCCCGTCTCCGTATTGTACACCGTGATGTGAAGGCTAGTAATATTTTGCTTGACTATGAGCTTGTCCCCAAAATATCTGATTTTGGGTTGGCCAAATTGTACGATGATAAAAAGACCCATATAAGCACCCGTGTGGCTGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATATATTTTCGTTTGGTGTTGTTGCTCTAGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCAAGTTTGGAAGGAGAGAAGGTGTATCTTCTAGAATGGGCTTGGCAGCTTCATGAAAACAACCTCCTAATGGATCTGGTGGACCCTAGACTTTCAGAATTCAATGAGGAAGAAGTAAAACGTATGGTGGGAATAGCACTTATGTGCACTCAGACATCACCATCATTAAGACCATCAATGTCACGTGTGGTGGCAATGCTTTCAGGAGATATTGAAGTGACCCCTGTCACAACAAAGCCTGGATACCTTACTGACTGGAAATTTGATGATGTGACCAGCTTCATGACTGACGACGCAATCAAAGGATTAAATACAAGTTACCAGTATTCATCAGGAAGTACCAGCATGGTGGGTGGTGGTGCAGACTATTCACCAATAAGTGTTTCTAAACCGATCCTTAATGATTCTCTTAATGAGGGTAGGTAA 3114 0.4046 MGCWSHDLAFALVAVLFCLFSCLVSFSQAQSTNATTDPSEASTLNSIFSKWEISADTTQWNISGELCSGSAIDSTITIDTQSHNPFIKCDCSFLNRTTCRITALKVYALNVLGEIPEELGTLTYLTNLNIGQNYLTGSLPSTIGNLTRMQYLSLGINNLSGELPEELGNLTELLSLSFSSNNFSGSLPSELGKLTKLTQLYFDSSGISGPIPSSFANLRSLATVYASDTELTGNIPDFIGNWTSLQVLRFQGNSFNGSIPSSFSNLSSLTELRISGLSNGSSSLEFVQNMKSLITLELRNNNISGSIPSSIGELHNLTQLDLSFNNIEGQIPGSLFNLSSLSALFLGNNKLNGTLPTEKSSSSLQYIDLSYNDLSGSLPSWVNEANLQVNLVANNLSIDDASDTSGLPTGLNCLQKNFPCNRGAGRYSDFAIKCGGPQVRSTDGTVYEMENETLGPATYFVTDTSRWAVSNVGLFTGSSNPVFTRFVSNQFTNTMNTELFQTARLSPSSLRYYGLGLENGFYNITLQFAETAILDSATTWESLGRRVFDIYIQGNLVLKDFDIQKEAGGISYRAVQKQFRFEVSENYLDIHLFWAGKGTCCIPAQGTYGPLIQAIHAIPDFIPTVSNEPPSSKSNRTGLIVGIVIGVGVLSFLSVFVIFCIIRRRKRQHEDEELLGIDTKPYTFSYSELKNATNDFNLENKLGEGGFGPVYKGTLSDGRVIAVKQLSVASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGNKKLLVYEYLENKSLDQGLFGNSITLNWSTRYDICLGVARGLAYLHEESRLRIVHRDVKASNILLDYELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADIFSFGVVALELVSGRPNSDSSLEGEKVYLLEWAWQLHENNLLMDLVDPRLSEFNEEEVKRMVGIALMCTQTSPSLRPSMSRVVAMLSGDIEVTPVTTKPGYLTDWKFDDVTSFMTDDAIKGLNTSYQYSSGSTSMVGGGADYSPISVSKPILNDSLNEGR* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01684 1037 Gene3D Phosphorylase Kinase; domain 1 658 771 - -
Lapu11g01684 1037 ProSiteProfiles Leucine-rich repeat profile. 316 338 IPR001611 GO:0005515
Lapu11g01684 1037 ProSiteProfiles Protein kinase domain profile. 696 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01684 1037 SUPERFAMILY L domain-like 74 403 - -
Lapu11g01684 1037 SMART serkin_6 696 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01684 1037 Gene3D Ribonuclease Inhibitor 280 403 IPR032675 -
Lapu11g01684 1037 FunFam Leucine-rich repeat receptor-like protein kinase 665 771 - -
Lapu11g01684 1037 CDD STKc_IRAK 702 963 - -
Lapu11g01684 1037 Gene3D - 429 619 - -
Lapu11g01684 1037 FunFam Putative LRR receptor-like serine/threonine-protein kinase 772 975 - -
Lapu11g01684 1037 FunFam Putative LRR receptor-like serine/threonine-protein kinase 280 404 - -
Lapu11g01684 1037 Gene3D Transferase(Phosphotransferase) domain 1 772 972 - -
Lapu11g01684 1037 Gene3D Ribonuclease Inhibitor 37 279 IPR032675 -
Lapu11g01684 1037 Pfam Protein tyrosine and serine/threonine kinase 697 963 IPR001245 GO:0004672|GO:0006468
Lapu11g01684 1037 FunFam Leucine-rich repeat transmembrane protein kinase 38 279 - -
Lapu11g01684 1037 SUPERFAMILY Protein kinase-like (PK-like) 679 991 IPR011009 -
Lapu11g01684 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 993 - -
Lapu11g01684 1037 FunFam Leucine-rich repeat receptor-like protein kinase 427 619 - -
Lapu11g01684 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Lapu11g01684 1037 Pfam Malectin domain 429 615 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01684 Lapu-Chr11 26717423 26736505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01684 100 250 Receptor kinase-like Gene Family AT1G56120 28.477 1.72e-10 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01684 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01684 - - gmx:100798233 1656.34