Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01682 ATGACTTGTTTCCCATTCACATTTGGTAGGAAAGTGCCTTCTGTGGCAAAACACGATCCAGATATTGATGAAGAACTCTCAGGCATTCAAAATGTTAGAATCTTTACCTACAAAGAACTAAAAGTTGCGTCTGACAATTTCAGTCATGCCAATAAAATTGGACAGGGTGGCTTTGGTTCTGTTTATAAGGGATTGCTAAAAGATGGGAAACTAGCTGCCATAAAAGTTCTCTCAGCAGAATCAAGTCAAGGGGTGAAAGAATTTATGACAGAGATTAATGTGATCTCAGAAATAGAGCATGAAAATTTGGTTAAGCTATATGGTTGTTGTGTGGAAGGGAATAACCGAATATTAGTCTACAATTATCTTGAGAACAATAGTCTTGCGCAAACCCTTCTAGGTTCAGGTCACAGTAACATCTTTTTTGATTGGAAAACACGATCTAGGATATGCATTGGGATTGCACGTGGGCTCTCTTATCTACACGAAGAAGTAAAACCACATATTGTTCATAGGGATATAAAAGCAAGCAATATTCTTCTCGACAGAGACCTTACACCTAAGATTTCAGATTTTGGTCTTGCAAAGCTTATTCCATCGTACATGACTCATGTCAGCACGCGTGTGGCTGGAACAATAGGTTATTTGGCACCAGAGTATGCATTAAGGGGGCACCTGACACGAAAAGCAGATATTTACAGCTTTGGTGTACTCCTTGTGGAGATAGTAAGTGGAAGATGTCACACTAATACACGATTGCCGATGGGAGAGCAGTTTCTTTTAGAAACGACATGGGAACTTTATAAGCAAAGAGAATTGGTAGGGCTTGTAGATGTATCCCTAGATGGGCATTTCGATGCCGAGGAGGCCTGTAGATTTCTGAAAATTGGACTTCTTTGCACCCAGGACACGTCGAAACTCCGGCCACCAATGTCTTATGTGGTCAAGATGCTCACTGGAGAAATGGACATTGATGAAAGTAAGATAACAAAGCCAGGTTTGATTTCAGATTTTATGGACCTTAAAATCAGAGGAGATAAAAAGGGTGGTGGTGATAATGATACCAAGGGTTCATCTTCCTACAATGCATCCTCTGCTTCAGATAGCCAGGGCAATACCATGTCATATGCTGCAAGTACAGCAACAACTGCAACCTTCACTGTGAAATATGATCAAAGCTTGTAA 1185 0.4051 MTCFPFTFGRKVPSVAKHDPDIDEELSGIQNVRIFTYKELKVASDNFSHANKIGQGGFGSVYKGLLKDGKLAAIKVLSAESSQGVKEFMTEINVISEIEHENLVKLYGCCVEGNNRILVYNYLENNSLAQTLLGSGHSNIFFDWKTRSRICIGIARGLSYLHEEVKPHIVHRDIKASNILLDRDLTPKISDFGLAKLIPSYMTHVSTRVAGTIGYLAPEYALRGHLTRKADIYSFGVLLVEIVSGRCHTNTRLPMGEQFLLETTWELYKQRELVGLVDVSLDGHFDAEEACRFLKIGLLCTQDTSKLRPPMSYVVKMLTGEMDIDESKITKPGLISDFMDLKIRGDKKGGGDNDTKGSSSYNASSASDSQGNTMSYAASTATTATFTVKYDQSL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01682 394 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Lapu11g01682 394 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Lapu11g01682 394 MobiDBLite consensus disorder prediction 346 373 - -
Lapu11g01682 394 FunFam cold-responsive protein kinase 1 123 334 - -
Lapu11g01682 394 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 359 - -
Lapu11g01682 394 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Lapu11g01682 394 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
Lapu11g01682 394 MobiDBLite consensus disorder prediction 354 373 - -
Lapu11g01682 394 SMART serkin_6 47 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01682 394 FunFam cold-responsive protein kinase 1 18 122 - -
Lapu11g01682 394 Pfam Protein kinase domain 49 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01682 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lapu11g01682 394 CDD STKc_IRAK 53 320 - -
Lapu11g01682 394 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01682 Lapu-Chr11 26677439 26682833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01682 21 331 Receptor kinase-like Gene Family AT1G53430 55.128 2.32e-111 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01682 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01682 - - gmx:100800503 669.077