Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01676 ATGCCTGGGAACAAGTACAACGGAAACTCGAACCAAATTCCGGGGCGTGTGGAGCGGCTTCTGAGGGATAGAGAGCTGAGGAAGAGTGGGAGAGTGATTCAGTTGAAGGAGGGGAATGAGAGCAATGGGAACGGTGGTGAGGTTTTCGAGAAGGAGAAGGTGCGTTTGAGGGAAGAAGAGAGTGACGCGGGTGATGGTGTTGAAGGGAGTAGGGTGAGGAAGGGGGTGGGGGAGGAGAGGCATGAAACGAAGCCGTTTAGACAGAGGCTGTTGGTGGTGGCGAATAGATTGCCGGTGTCGGCAGTGAGGAAAGGTGAGGACGCGTGGTCGTTGGAGATAAGTGCCGGTGGTCTCGTCAGCGCGTTGTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCTGGAGTGAACGTGCCAGATGAGATTGGACAGAAGGCACTCACTAAAGCGTTGGCTGAGAAGAGGTGTATCCCTGTATTTCTTGATGAAGAGATTGTTCATCAGTATTATAATGGCTATTGCAACAATATACTGTGGCCCCTTTTCCACTACCTTGGACTTCCACAAGAAGACCGCCTTGCCACCACACGCAGTTTTCAGTCTCAGTTTGAGGCGTATGAGAAAGCAAATCAGATGTTTGCTGATGTTGTGAACAAGCACTATGAAGAGGGCGATGTTGTTTGGTGCCATGACTACCATCTCATGTTCCTTCCAAAATGCCTAAAGAAACATAACAAAAAAATGAAAGTTGGATGGTTTCTCCACACCCCTTTCCCGTCTTCTGAAATTCACAGGACACTGCCATCTCGTTCAGAGCTCCTTCATTCCGTTCTCGCTGCTGATTTAGTTGGTTTTCACACCTACGATTATGCAAGACATTTTGTTAGTGCCTGTACTCGCATCCTTGGACTTGAAGGTACACCTTATGGGGTTGAGTATCAAGGGAAGCTAACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCAGAACGATTTATTCGAGCTCTTGACCTTCCTGCAGTACAAGACCACATCAAGGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAAGATCCTTATTGGCGAGATAAAGTTGTTTTGCTACAAATAGCTGTGCCGACAAGAACAGATGTTCCCGAGTATCAGAAGCTTACAAGCCAGGTTCATGAAATAGTTGGGCGCATCAATGGCAGATTTGGAACATTGACTACTGTTCCTATACATCACTTGGATCGGTCACTTGACTTTTATCAACTATGTGCTTTGTACGCTGTTACTGATGTAGCACTAGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCGCAGTCTCTTGGGGCTGGGGCTATTCTTGTCAATCCATGGAACATTACAGAAGTTGCTGCTGCAATTGGCAGGGCTTTGAAGATGCCATCTGCAGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTCAAATCCCACACTGCTCAAGAATGGGCAGGAACCTTTCGACGTAATGAACTAAATGATACTGTTATTGAGGCACAGCTAAGGACAAGACAAGTTCCACCTCAACTTCCAACCAAGACTGCAATTGAAAGTTATCAGCAATCAACTAATCGATTACTCATTTTGGGATTCAGTGGAACTTTAACTGAACCAGTCGAGAAAACAGGTGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAAAATTGAAACAACCCTTGACAGCACTGTGCAGTGATCCAAATACCACAGTTGTTGTGCTCAGTGGAAGTGGTAGACAAGTCCTAGATGATAACTTTAAAGAATATGACATGTGGTTGGCGGCTGAGAATGGAATGTTTTTACATCCTTCAAAGGGTGAGTGGATGACGACAATGCCAGAGCATCTGAATATGGAATGGCTTGATAGTGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCTCGGTCACATTTTGATTTTGAAGAAAGAGAAACTTCACTTGTATGGAATTACAAATATGCAGATGTTGAGTTTGGAAAGCTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCAGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACGAAGGGAGCAGCCATTGACCGCATATTGGGTGAGATAGTGCACAGTAAATCAATGACATCACCAATTGATTATGTTCTTTGCATAGGACATTTTCTGGGGAAGGATGAAGATATTTATTCATTTTTTGAGCCAGATCTTCCCTCTATTGGTGTTGGTCTTCCACGAAGCAAGGTAACAACAGATGGAGTTAAGTTTCCTGTTGAAAGGAAACCATCTTTAAAGGTCCCAGCGACTAAGAGTGGACCAAAGTCATCTCAAAATAAGGCAATTCGACCAGGGTCAAATTCTGAGAAGAAAACAAGCAATCATATCTGCGTTACACCACGAAGGCCAGCTCCTGAAAAGGTTTCATGGAACGTCCTTGACCTTAAGAAAGAGAATTACTTCTCTTGTACCGTTGGACGAACTCGAACAAATGCTCGCTATACGCTTGATTCTTCGGACGATGTTGTTTCATTTCTGAAGGAACTGGCTAATGCTTCTTACCGAAATTACCACTGA 2787 0.4403 MPGNKYNGNSNQIPGRVERLLRDRELRKSGRVIQLKEGNESNGNGGEVFEKEKVRLREEESDAGDGVEGSRVRKGVGEERHETKPFRQRLLVVANRLPVSAVRKGEDAWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYEKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKKHNKKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPAVQDHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEEDPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFYQLCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIGRALKMPSAEREKRHKHNFLHVKSHTAQEWAGTFRRNELNDTVIEAQLRTRQVPPQLPTKTAIESYQQSTNRLLILGFSGTLTEPVEKTGDQIKEMELKVHPKLKQPLTALCSDPNTTVVVLSGSGRQVLDDNFKEYDMWLAAENGMFLHPSKGEWMTTMPEHLNMEWLDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDIYSFFEPDLPSIGVGLPRSKVTTDGVKFPVERKPSLKVPATKSGPKSSQNKAIRPGSNSEKKTSNHICVTPRRPAPEKVSWNVLDLKKENYFSCTVGRTRTNARYTLDSSDDVVSFLKELANASYRNYH* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01676 928 Gene3D - 677 759 - -
Lapu11g01676 928 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 677 759 - -
Lapu11g01676 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 81 921 IPR001830 GO:0003824|GO:0005992
Lapu11g01676 928 MobiDBLite consensus disorder prediction 835 865 - -
Lapu11g01676 928 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 550 - -
Lapu11g01676 928 Pfam Glycosyltransferase family 20 89 550 IPR001830 GO:0003824|GO:0005992
Lapu11g01676 928 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 89 549 IPR012766 GO:0003825|GO:0005992
Lapu11g01676 928 Gene3D - 591 814 IPR023214 -
Lapu11g01676 928 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 336 538 - -
Lapu11g01676 928 MobiDBLite consensus disorder prediction 840 864 - -
Lapu11g01676 928 MobiDBLite consensus disorder prediction 34 79 - -
Lapu11g01676 928 FunFam Alpha,alpha-trehalose-phosphate synthase 611 681 - -
Lapu11g01676 928 CDD GT20_TPS 89 549 IPR001830 GO:0003824|GO:0005992
Lapu11g01676 928 MobiDBLite consensus disorder prediction 46 79 - -
Lapu11g01676 928 Pfam Trehalose-phosphatase 609 812 IPR003337 GO:0003824|GO:0005992
Lapu11g01676 928 Gene3D Glycogen Phosphorylase B; 80 335 - -
Lapu11g01676 928 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 81 335 - -
Lapu11g01676 928 Gene3D Glycogen Phosphorylase B; 336 539 - -
Lapu11g01676 928 CDD HAD_TPP 588 821 - -
Lapu11g01676 928 SUPERFAMILY HAD-like 587 920 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01676 Lapu-Chr11 26431276 26453976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01676 1 923 Trehalose Biosynthesis Gene Families AT1G78580 75.899 0.0 1440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01676 K16055 - gmx:100797320 1701.8