Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01670 ATGGCCATTGTTCTTATTTGCAAGCTTTTGTTACTCTTTTCTCCATTTTGCAATGGAGCTTCCACCATCACCCAGCTTCAGCCACTTTCCGACGACGGCACCACCTTGGTTTCTAAAGAGGGAACCTTCGAGTTGGGCTTCTTCAGTCCCGGGAGTTCCAACAACCGCTACATCGGAATCTGGTACAAAAACGTCCCTGTCAAAACAGTGGTTTGGGTGGCCAACCGCGACAACCCAATCAGACACGACAACATCAACAACAACTCAGGCACAAACAAGATGATGATAAGCCAAGAGGGAAACCTCGTAATTTTTAGCCAGAACGAGACTCTTGTTTGGTCTGCAAATGCAACGAAGAAGGTTTCAAATCCAACTGTGCAGCTCTTGGACAGTGGAAACTTGGTAATGAGAGATGCAAATGAAGAAGAAGAGAGTGCTTTTCTGTGGCAAAGCTTTGACTTTCCTTGTGACACACTATTACCAGGAATGAAGTTTGGTTGGGACTTAAGAAGAGGTCTTAACAGGCATCTTACTGCTTGGAAAAACTGGGATGACCCATCTTCAGGGGACTTTACATGGGGAGTGGAGTTAGGAAGCAACCCTGATATTGTGATGTGGAAGGGTAAAACTGAGTACTTTAGGACAGGACCCTATACTGGGAACATGTTCAGTGGGGTCTATGGTCCCAGAAATAACCCACTTTATGATTACATCTTTGTGAACAACAAAGAGGAAGTGTATTACCAATACACACTGAGAAATAGTTCAGTCATCACTATAATTGTCATGAACCAAACCCTTTATCTTCGTCATCGTGTTACGTGGATTCCTGAAGCCAAAGCTTGGACCATTTACCAATCCTTGCCACGAGACAGTTGTGATGTGTACAACACTTGTGGACCCAATGGAAACTGTGTCATTGCTGGCTCACCAATTTGCCAGTGCTTAGATGGGTTTGTGCCAAAATCGTCACAGCAGTGGAATGCAATGGATTGGAGACAAGGGTGTGTGCGAAGTGAAGAGTGGAAATGTGGGGTGAAAGACAAAGATGGTTTTCGCAGATTTGCTGGTATGAAACTGCCAAATACCACACATTCTTGGGTTAATCAAAGTATGACACTTGAGGAGTGCAAGGCTAAGTGTTTGAAAAATTGTTCATGCACTGCTTATTCCAATTTGGACACCAGAGGAGGAGGAAGTGGGTGTTCTATTTGGGTTGGAGATCTTTTTGATTTGAGAGTTATAGAAAGTGGCCAAGATTTGTATGTTCGAATTGCCACTTCGGATACAGATGGTAAACACGGGCGGCGGAAAAAGGTAATAGTGGTGGTTTCAGTCGTAGCATCGTTGGTGTTTGTGATGCTATTAACATCCTGTATTTACATGACCAAAAAATACAAAGGGAAAATGAAAAAAAAAATGACGACAGAGGATAAAAAAGAAGGACAACAAGAAGACTTAGAGTTTCCTTTCTTTGATCTTGCTACAATGGTTAAAGCTACTAATAACTTTTCAATTGAGAATAAGCTTGGAGAGGGTGGTTTTGGTCCTGTATACAAGGGCACGTTAGTAGATGGACAAGAAATTGCAATCAAAAGACTTTCACGAAGTTCAGGACAAGGATTGAAAGAATTTAGAAATGAAGTGATATTGTGTGCCAAACTTCAACATCGAAATCTTGTGAAGGTTATTGGTTATTGCATTGAACAAGAGGAGAAAATGCTACTTTATGAATACATGCCAAACAAAAGTCTTGATTTAATTATTTTTGATTCATGTCAAAGTAAACTTTTAGATTGGCAAATGCGCTTTGACATTTTGAATGCAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACATAGAGATCTCAAAGCAAGTAATATTTTATTAGATAATGATATGAATCCAAAAATTTCTGATTTTGGCCTTGCGAGAATATGTGGAAGTGATCAAGTCGAAGGAAGTACAAGCATCATAGTCGGAACTCATGGTTACATGGCACCTGAGTATGCTATTGATGGATTGTTCTCTACAAAATCTGATGTCTTCAGCTTTGGAGTGTTATTACTAGAAATTCTTAGTGGAAAGAAAAATAGAACATTTACCTTCCAAGACAACAATCACAACCTTATTGATCTTGCATGGAGTTTGTGGAAAGAGGGTACTCCAGAGCAATTGATTGATGCTTGTTTAGAGAACTCATGTAATGTGTTTCAAGTTATACGATGCATTCAAATTGGTCTTTTGTGTCTACAACATCATCCAAATGATAGACCAAATATGACATCAGTTGTTGTTATGTTGACCAGCGAAAATGCTTTACCTGAACCTAAGGAGCCTGGTTTCTTAATTAGAAGAATCTCAAAAGAAGGAGAAGATTCTTCTAATAGACAAACATCTTCTTCAATCAATGAAGCATCTATATCACTTTTAAATGCTAGATAA 2466 0.3958 MAIVLICKLLLLFSPFCNGASTITQLQPLSDDGTTLVSKEGTFELGFFSPGSSNNRYIGIWYKNVPVKTVVWVANRDNPIRHDNINNNSGTNKMMISQEGNLVIFSQNETLVWSANATKKVSNPTVQLLDSGNLVMRDANEEEESAFLWQSFDFPCDTLLPGMKFGWDLRRGLNRHLTAWKNWDDPSSGDFTWGVELGSNPDIVMWKGKTEYFRTGPYTGNMFSGVYGPRNNPLYDYIFVNNKEEVYYQYTLRNSSVITIIVMNQTLYLRHRVTWIPEAKAWTIYQSLPRDSCDVYNTCGPNGNCVIAGSPICQCLDGFVPKSSQQWNAMDWRQGCVRSEEWKCGVKDKDGFRRFAGMKLPNTTHSWVNQSMTLEECKAKCLKNCSCTAYSNLDTRGGGSGCSIWVGDLFDLRVIESGQDLYVRIATSDTDGKHGRRKKVIVVVSVVASLVFVMLLTSCIYMTKKYKGKMKKKMTTEDKKEGQQEDLEFPFFDLATMVKATNNFSIENKLGEGGFGPVYKGTLVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVIGYCIEQEEKMLLYEYMPNKSLDLIIFDSCQSKLLDWQMRFDILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARICGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEILSGKKNRTFTFQDNNHNLIDLAWSLWKEGTPEQLIDACLENSCNVFQVIRCIQIGLLCLQHHPNDRPNMTSVVVMLTSENALPEPKEPGFLIRRISKEGEDSSNRQTSSSINEASISLLNAR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01670 821 SMART blect_4 27 155 IPR001480 -
Lapu11g01670 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Lapu11g01670 821 CDD B_lectin 27 155 IPR001480 -
Lapu11g01670 821 Pfam Protein tyrosine and serine/threonine kinase 505 773 IPR001245 GO:0004672|GO:0006468
Lapu11g01670 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 152 - -
Lapu11g01670 821 MobiDBLite consensus disorder prediction 801 821 - -
Lapu11g01670 821 Pfam D-mannose binding lectin 69 181 IPR001480 -
Lapu11g01670 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Lapu11g01670 821 ProSiteProfiles Bulb-type lectin domain profile. 20 149 IPR001480 -
Lapu11g01670 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 766 - -
Lapu11g01670 821 Pfam PAN-like domain 344 412 IPR003609 -
Lapu11g01670 821 CDD STKc_IRAK 510 776 - -
Lapu11g01670 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Lapu11g01670 821 ProSiteProfiles PAN/Apple domain profile. 344 426 IPR003609 -
Lapu11g01670 821 Pfam Domain of unknown function (DUF3403) 777 821 IPR021820 GO:0004674
Lapu11g01670 821 CDD PAN_AP_plant 347 426 - -
Lapu11g01670 821 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01670 821 MobiDBLite consensus disorder prediction 797 821 - -
Lapu11g01670 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 186 IPR036426 -
Lapu11g01670 821 SMART serkin_6 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01670 821 Gene3D Hepatocyte Growth Factor 343 426 - -
Lapu11g01670 821 SMART ntp_6 347 425 IPR003609 -
Lapu11g01670 821 Gene3D - 17 152 IPR036426 -
Lapu11g01670 821 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Lapu11g01670 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 579 - -
Lapu11g01670 821 Gene3D Transferase(Phosphotransferase) domain 1 580 785 - -
Lapu11g01670 821 SUPERFAMILY Protein kinase-like (PK-like) 487 789 IPR011009 -
Lapu11g01670 821 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Lapu11g01670 821 Gene3D Phosphorylase Kinase; domain 1 461 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01670 Lapu-Chr11 26314299 26319552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01670 432 821 Receptor kinase-like Gene Family AT4G05200 47.772 3.16e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01670 Pkinase 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01670 - - gmx:100776310 1372.45