Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01624 ATGGCTCCGACAGACAACAGATCCGACCATGTATCCGGGTCCAATTCGACCCGTTTGAACAAAGAGATCCGATACCGCGGGGTCAGGAAGAGACCATGGGGCCGTTACGCCGCGGAGATCCGCGACCCAGGGAAGAAAACACGCGTCTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCGCGTGCGTATGACGCGGCGGCGCGTGATTTCCGCGGCGCGAAGGCTAAGACCAATTTCCCCACACACGCCGAACTTACCCACGTGGCGCGTAGCCCCAGCCAGAGCAGCACCCTCGAGTCTCCTTCTCCTCCGCCGCTCGACCTCACTCTCACCCCACTCGCCGCCACCGGGGCATTCATGTTCCCCGTCGCCCGCCCCGTGGTTTTCTTCGACGCCTTTGCGCGTGCGGAGGTGCGCGCTTTCGATCTTCCGGTGACAGCTTTTCGCCGCGCCGCCGCCACCACTCAGAGTGACTCCGACTCGTCCTCCGTCGTGGACTACGAGCGGGTCCCACATCGGAGAGTGTTGGATCTTGACCTTAATGTTCCTCCTCCGCCCGAGGTTGCCTGA 573 0.6353 MAPTDNRSDHVSGSNSTRLNKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAARDFRGAKAKTNFPTHAELTHVARSPSQSSTLESPSPPPLDLTLTPLAATGAFMFPVARPVVFFDAFARAEVRAFDLPVTAFRRAAATTQSDSDSSSVVDYERVPHRRVLDLDLNVPPPPEVA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01624 190 MobiDBLite consensus disorder prediction 1 21 - -
Lapu11g01624 190 Gene3D AP2/ERF domain 23 83 IPR036955 GO:0003700|GO:0006355
Lapu11g01624 190 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Lapu11g01624 190 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Lapu11g01624 190 CDD AP2 24 83 IPR001471 GO:0003700|GO:0006355
Lapu11g01624 190 FunFam Ethylene-responsive transcription factor 2 24 82 - -
Lapu11g01624 190 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Lapu11g01624 190 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Lapu11g01624 190 MobiDBLite consensus disorder prediction 1 23 - -
Lapu11g01624 190 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Lapu11g01624 190 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Lapu11g01624 190 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 15 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01624 Lapu-Chr11 24498801 24499778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01624 14 150 AP2-EREBP Transcription Factor Family AT3G15210 60.625 7.44e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu11g01624 AP2 5.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01624 K09286 - gmx:100785455 226.098