Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01617 ATGGCTGACATAGCAGGTCTGGTTGAGGCTGCAGGGGCAAGATTTAGTTCATTGGAGCTCATTGGGCAGGGATCATTCGGCGACGTGTATAAAGGGTTTGACAAGGAGCTAAACAAAGAAGTTGCTCTCAAAGTGATTGATTTGGAAGAATCAGAGGATGAAATAGAGGACATTCAAAAGGAAATTTCTGTTTTGTCACAATGTCGATCTGCATACATTACAGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTGCAATCAGGTCCCCCGCTTGATGAAATGTCAATTGCTTGCATTCTACGTGATTTACTTCATGCAATTGATTACTTACATACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACTGAGAATGGTGATGTAAAGGTTGCCGATTTTGGTGTTTCTGCACAGTTAACAAGAACCATATCAAGGAGAAAGACCTTTGTAGGAACACCATTTTGGATGGCACCCGAGGTTATTCAAAATTCAGAAGGATATAATGAAAAGGCAGATATCTGGTCTCTTGGAATTACTGCAATAGAGATGGCAAAAGGCGAGCCTCCACATGCTGATCTTCATCCAATGAGAGTCCTTTTCATCATACCTCGAGAGAATCCACCACAACTAGATGAGCACTTTTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGGTTCCTGCGGAGAGGCCAAGTGCTAAAGAGCTTCTTAGACATCGATTCATTCGGAATGCCAGGAAGAGTCCTCCTAAGCTATTGGAGAGAATAAGGGAGCGTCCAAAGTTCCAAATAAAGGAAGACGAGGCAACACCTAGAAATGTCCCAAGGGGGATGGGGGAGGCATCTGACACTATTAAGGTTGCAAAAGATTTAAGGAGTGATGAGACTAATCAGCCTAGTGGCCAAGGTAAAACCCTGAAAAGTTCTGGGTGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTGTCACGACCACCTCAGTTTAGAGATAAGAAAACTGAAGTTTCAAATCATCAGCTTAACCAAAAAAAAAGTCCAGAGAGTGGCTATCAAGGGGAATCTGACAATAAAAATGAGTTGCTGGAGACTTCTTTTGTAAAAGATTTTGGAGTACCCTACCATGATGAACATCTGGATAATCATACTGAAGATCAGGACGAGTTGTTTGGGAATGGATTAGGAACTGTTGTTGTTCAGTCTCCGAAAGGACCACAGTCATCACTGTTTCGTGACCAAAGTTCCCGCTCTAGCAGCAGCTATGCATCTTTTGAAGATGTTTCTACTAGCGGAACTGTTGTTCTGCGTAATCAGCATGATGATTCTGATTCTCCACACACACCAAGGTCTCGACTGGGACTTAATAGCAGAAATTTAAATGCCTCATTTGAAGATAGTGCTACAAATCTTGCCGAGGCAAAGGCTGCTATTCAAGGTGGATTGAGGAAAATGAATGTCCGGGATAGATTTGCACTGGGAAAACTCAACAATGATGTACAGGAAAGCAGGAGAGATCAAATGTCAACCAGCTCTGATTCTTCTAGGCCATCTCGTGAATACATTGATGCACAAAAGGGAATTTCAAGATCTCTTAATGCTATTGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCTGCACCGCTATCTGTATTGCTTATTCCTTCATTAAAAGAGGCCATAGCTGAGGATCCAGAAGGGCCAATTGTGCAAATTGTTATCAATGCTCTTGTAAACATGGAGAGGACAAGACCCCAATCCTGTGATGCTCTTGTCAAAAAGTTACTTCAGCGGTTGGCGAGTTCGAAGGAATTATCATTGAAGGACCTGCAAGAACTGGCTGGCCAAATACTCAGCAAGACTAAGTCAGCTGAAGAAACCCGAAATGCAGAGACAGATCACAAGAAGAAACAAAACAAGGAACTTCATTCAAATAGCAATTTAAGCCCCCTCGCAAGATTCCTTCTCTCAAGGTTGAAATATGGTTATATTTTGTTTTTGGTCCCTACAATCTTCTTTTGA 2109 0.4149 MADIAGLVEAAGARFSSLELIGQGSFGDVYKGFDKELNKEVALKVIDLEESEDEIEDIQKEISVLSQCRSAYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPHADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPPKLLERIRERPKFQIKEDEATPRNVPRGMGEASDTIKVAKDLRSDETNQPSGQGKTLKSSGWDFSIGGSQGTGTFRSVSRPPQFRDKKTEVSNHQLNQKKSPESGYQGESDNKNELLETSFVKDFGVPYHDEHLDNHTEDQDELFGNGLGTVVVQSPKGPQSSLFRDQSSRSSSSYASFEDVSTSGTVVLRNQHDDSDSPHTPRSRLGLNSRNLNASFEDSATNLAEAKAAIQGGLRKMNVRDRFALGKLNNDVQESRRDQMSTSSDSSRPSREYIDAQKGISRSLNAIDDEESAKIISSSAPLSVLLIPSLKEAIAEDPEGPIVQIVINALVNMERTRPQSCDALVKKLLQRLASSKELSLKDLQELAGQILSKTKSAEETRNAETDHKKKQNKELHSNSNLSPLARFLLSRLKYGYILFLVPTIFF* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01617 702 MobiDBLite consensus disorder prediction 284 385 - -
Lapu11g01617 702 SUPERFAMILY Protein kinase-like (PK-like) 14 268 IPR011009 -
Lapu11g01617 702 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01617 702 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lapu11g01617 702 MobiDBLite consensus disorder prediction 531 546 - -
Lapu11g01617 702 MobiDBLite consensus disorder prediction 650 672 - -
Lapu11g01617 702 MobiDBLite consensus disorder prediction 428 467 - -
Lapu11g01617 702 CDD STKc_MST3_like 14 286 - -
Lapu11g01617 702 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01617 702 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Lapu11g01617 702 MobiDBLite consensus disorder prediction 653 671 - -
Lapu11g01617 702 MobiDBLite consensus disorder prediction 284 298 - -
Lapu11g01617 702 MobiDBLite consensus disorder prediction 526 548 - -
Lapu11g01617 702 MobiDBLite consensus disorder prediction 319 353 - -
Lapu11g01617 702 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 12 645 - -
Lapu11g01617 702 FunFam serine/threonine-protein kinase dst1 isoform X1 12 301 - -
Lapu11g01617 702 Coils Coil 41 68 - -
Lapu11g01617 702 MobiDBLite consensus disorder prediction 424 485 - -
Lapu11g01617 702 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01617 702 MobiDBLite consensus disorder prediction 369 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01617 Lapu-Chr11 24334941 24377297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01617 1 687 MAP Kinase Kinase Kinase Kinase AT3G15220 64.069 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lapu11g01617 Pkinase 3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01617 K08838 - gmx:100786501 1172.15