Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01603 ATGGAGCTTCAAAAACCTCTATACCTCTTCTTCTTTCTTCTCCTCACTCTTCTCTCAAGCTCCCAAGCCAAGAAATTGAACGTTGGTGGAAGCCAAGGGTGGGTTCCAAATCCTTCCGAGAGTTACAACAACTGGGCTGGAAGAAACCGATTCCAAATCAATGACACAATAGTTTTCAACTACAAGAAGGGTTCGGACTCGGTGTTGGAAGTGAAGAAGGACGATTATGACAAGTGCAACAAAACCAGCCCAATCAAGAAGTTTGAAAACGGTGACACTGAGTTCAAGTTTGATCGATCAGGTCTATTCTACTTCGTTAGTGGAAAAGATGGAAATTGTGAAAAGGGTCAGAAATTAATCGTTGTTGTTTTATCCCCAAGAACACCACCTAAACAACAATCGTCTCCACCAACACCTTCACCATCACCATCGTTTCCACCAAAACCTTCACCTTCACCCTCACCAAAGCCTAACCCACCAACCGTGTCGCCATCCTCTTCACCGTCTCCAGCGGTTCAACCGCCGCCAGACTCTCCACCGGCACCGCCACCGGAGATGGGGACTCCACCGCAGTCGCCGCAGGGGCCAACTTCTCCACCGCGGTCGGCGCCGTCTAATTCAACGGCTCTGTCACCGACGAGTGATGGATTTTCTGTGGCTCCTTCAATCGTTTTGGTGTATTCCGTTACAATTGCCGTTGGTGCTGCGTTGTTCCGTTATTGA 723 0.4882 MELQKPLYLFFFLLLTLLSSSQAKKLNVGGSQGWVPNPSESYNNWAGRNRFQINDTIVFNYKKGSDSVLEVKKDDYDKCNKTSPIKKFENGDTEFKFDRSGLFYFVSGKDGNCEKGQKLIVVVLSPRTPPKQQSSPPTPSPSPSFPPKPSPSPSPKPNPPTVSPSSSPSPAVQPPPDSPPAPPPEMGTPPQSPQGPTSPPRSAPSNSTALSPTSDGFSVAPSIVLVYSVTIAVGAALFRY* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01603 240 Gene3D - 22 127 IPR008972 -
Lapu11g01603 240 PRINTS Proline rich extensin signature 172 189 - -
Lapu11g01603 240 PRINTS Proline rich extensin signature 153 169 - -
Lapu11g01603 240 PRINTS Proline rich extensin signature 125 146 - -
Lapu11g01603 240 MobiDBLite consensus disorder prediction 201 218 - -
Lapu11g01603 240 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Lapu11g01603 240 MobiDBLite consensus disorder prediction 127 219 - -
Lapu11g01603 240 MobiDBLite consensus disorder prediction 130 200 - -
Lapu11g01603 240 CDD OsENODL1_like 24 124 IPR041846 -
Lapu11g01603 240 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
Lapu11g01603 240 FunFam Early nodulin-like protein 1 23 128 - -
Lapu11g01603 240 PANTHER BLUE COPPER PROTEIN 25 159 IPR039391 GO:0009055
Lapu11g01603 240 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01603 Lapu-Chr11 23762626 23763685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01603 3 189 Phytocyanin Superfamily AT5G53870 47.895 2.52e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01603 - - gmx:100795901 228.024