Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01588 ATGGGAGAATCACAGAACCACCATCTCAATCCCCAAGCAGCAACACCGTCGAGGTCGGCGATGAGAGGCGGCGGCGAGATCGTGGAGGTGCAAGGCGGCCACATTGTCCGCTCCACCGGGCGGAAGGACCGCCACAGCAAGGTCTGCACTGCCAAAGGCCCCAGAGACCGACGTGTGCGCCTGGCGGCGCACACCGCCATCCAATTCTATGACGTCCAGGACCGCCTCGGCTATGACCGCCCCAGCAAGGCGGTCGACTGGCTCATAAAAAAAGCCAAGGCGGCCATCGACGAGCTCGCGGAGCTCCCACCATGGAACCCCACGGCCACGTCAATGCAACCGACTCAACAACAGGAAATCGTCCTCCGCGAGAACAAGTCTCTCGCTATGGATGACCCAGTAGCCTTCGGTAGCCGTGGCGAGAGCAATGTTGTCCACACCGCTTCCAGTGTTCCAGAACAACTCTCTCACCAGCAGTTGGAGAGTGAAAATGCTAACAACATCAGCAACAGCAAGTACACCAGTGGTTCTGGTTTTCTGCCACCGTCTTTGGACACTGATAACATTGCTGAGACAATCAAGTCTTTCTTTCCCGTCGAAGCTACCACGACGTCATTTCAGAGTTACCCTCCGGGGCCACCGGATTTGAGGCAGCAAGATCTGCGTTTGTCGTTGCAGTCCTTTCAGGACCCTATCATGCTTCAGCACCAGCCTCAGAGCCACCACGAGCCTGTGCTGTTCGCCGGAACGGCTCTCGGCTTCGACGCCGGTTCCGGCTGGTCGGAGCACCAGCACCAACACCACCACTCGGAAGAGCATAGGTTGCTCTTTGGTGGCAGCAGTGGCCATGGCGGTGGGTTTGTGTTCAACACGCCGACGCCGGCATTTGGCCAATTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCAGTTCGTGCTTGGATAGACCCTTCGGTCGATCACCACCACCACAACCATCACTACCTCTCGCCGCTGATCCATCAGGGATCCGTTGCCGGCGGCTTTTCCGCCGGCGGTGGATTCTCTGGCTTTCGCATTCCAGCACGAATCCAGGGTGAAGAGGAACACGACGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1149 0.5788 MGESQNHHLNPQAATPSRSAMRGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPPWNPTATSMQPTQQQEIVLRENKSLAMDDPVAFGSRGESNVVHTASSVPEQLSHQQLESENANNISNSKYTSGSGFLPPSLDTDNIAETIKSFFPVEATTTSFQSYPPGPPDLRQQDLRLSLQSFQDPIMLQHQPQSHHEPVLFAGTALGFDAGSGWSEHQHQHHHSEEHRLLFGGSSGHGGGFVFNTPTPAFGQFFSQRGPLQSSNTPSVRAWIDPSVDHHHHNHHYLSPLIHQGSVAGGFSAGGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01588 382 MobiDBLite consensus disorder prediction 357 382 - -
Lapu11g01588 382 MobiDBLite consensus disorder prediction 36 54 - -
Lapu11g01588 382 MobiDBLite consensus disorder prediction 1 17 - -
Lapu11g01588 382 MobiDBLite consensus disorder prediction 1 54 - -
Lapu11g01588 382 Pfam TCP family transcription factor 40 164 IPR017887 -
Lapu11g01588 382 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 308 IPR005333 GO:0003700
Lapu11g01588 382 ProSiteProfiles TCP domain profile. 41 99 IPR017887 -
Lapu11g01588 382 MobiDBLite consensus disorder prediction 359 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01588 Lapu-Chr11 22914251 22917081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01588 23 382 TCP Transcription Factor Family AT1G53230 50.129 3.58e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu11g01588 TCP 9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01588 - - ccaj:109787789 545.814