Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01571 ATGGAACTCAAGAAATGGGTTCCCTGTGTCGTGGTTTTCATTTTTCTACTTTTGGTTAATGGGTCATTTTCCTTATACACTCCTCCTGATAGCTATCTAATCGCATGTGGTTCTTCTCAAAACATCACCTTTCAAGGTCGCACTTTTGTTCCCGATTCACAGCATTCTTCACTTGTAATGAAAACTGGGAATTCTTTTGTTGCTAGCACCAATTCTAGTGCCCCATTTCCTATTTACCAATCGGCTCGGGTTTTCACTGAGAAAGCTTCTTATAGGTTTGAGATTCAGCAAGAAGGTAGGCACTGGGTTAGGCTATACTTTTCCCCTATTCCAAACTCCGGCCACAACTTGACTTCAGCTTCTTTAACAGTGGTTACTGATAAGTTTGTACTTTTGAGCAACTTCACCTTTAGGAAGTACAATGGTTCTTATATGTTCAAGGAGTATGCAATCAATGTTACCTCTGATACATTGGATGTAACCTTCATTCCTTCGAATGGTTCGGCGGCCTTTGTCAATGGAATTGAAGTTGTGTCAATGCCGAATGAGTTGTTTGTTGATCAGGCACTCGCTGTTAACCCGCCAGCACCATTCAATGGACTTTCTGAACTTGCCTTTGAAACTGTTTATCGCTTGAATATGGGGGGTCCTTTGATTACTTCTGAAAATGACACCCTGGGTAGGACTTGGTTGAATGATAGGAAATACCTTCATGTGAACAGCTCGGTCCTTAATGTATCCGTGAATCCTTCGAGCATTAAGTATCCCGTGGCTGTTAGACCTGAGACGGCCCCAAATTGGGTCTATGCCACTGCTGAAGCGATGGGGGATGCTAATGTCAATGATCCAAATTTCAACATTACTTGGGTCTTCAATGTGGATCCAAATTTCTCCTATTTCATCCGGGCGCACTTTTGTGATATTATGAGCAAGTCACTCAACACTTTAGTGTTCAATGTGTTCATAAATTCCGACATAGCTCTACAAAGCCTTGATCTCTCAACCATCACTAATGACTTGGCTGTTCCTTACTACAGGGACTTTGTTGCCAATGCCTCTGCAGACTCTAACACTTTGACTGTGAGTGTTGGTCCAGACACTGTGGCAGACTTTCCGAATGCCACTATGAATGGGTTGGAGATAATGAAGATCAGCAACTCATTAAGGAGCTTGGATGGGCTTTATTCAGTTGACACTCTTCTTCCAGGTTCACACTCAAAGAAAAGCATGGTAGGAGTAATTGTTGGCTCTGCTGTTGGGGCTCTAGCTGCTGTAGCGATAGTTGGTTTGTGTTATTGCTGCTTGGTGAGAGGCAAATCAAAGTCATCCAATCAACAGGGCCATTCATGGCTGCCTTTGCCCCTTTATGGAAACTCTCTTACCATGACAAAAAATTCAACAATTTCACAGAAGAGTGGAACTGCAAGCTGCATTTCTTTAGCTTCAACAAATCTTGGACGATTCTTCAGTTTCCAGGAAATCCTAGATGCTACCAACAAATTTGATGAGAAGCTACTTCTCGGTGTTGGTGGTTTTGGAAGGGTTTACAAGGGAACGCTTGAAGATGGGACCAATGTAGCTGTTAAAAGGGGTAACCCAAGATCTGAGCAAGGCCTTGCAGAATTCCGGACAGAGATTGAAATGTTATCCAAGCTTCGCCATCGTCATCTTGTGTCCCTCATTGGTTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATACATGGCTAACGGACCCCTCCGGAGTCATCTGTATGGAACAGACCTGCCGCCTCTCTCATGGAAGCAGCGGCTTGAGATTTGTATTGGAGCAGCAAGAGGCCTTCATTATCTCCACACCGGTGCAGCTCAAAGCATAATTCACCGTGATGTAAAGACAACAAATATCCTCTTAGATGAGAACTTTGTTGCCAAAGTTGCTGATTTTGGCCTCTCCAAGACTGGTCCTGCTCTTGATCAGACCCATGTGAGCACTGCTGTTAAGGGTAGTTTTGGATATCTTGATCCTGAATACTTCAGAAGGCAACAGCTTACTGAAAAATCAGATGTGTACTCATTTGGGGTAGTATTAATGGAAGTGTTATGCACAAGGCCAGCTTTGAACCCTGTCCTTCCAAGGGAGCAGGTCAACATAGCAGAATGGGCAATGACCTGGCAGAAAAAGGGTATGCTTGACCAAATCATGGATCAAAATCTTGTTGGCAAGGTGAATCCAGCTTCCCTTAAGAAGTTTGGGGAAACAGCCGAGAAGTGCTTGGCTGAACATGGTGTGGACCGGCCTTCTATGGGAGATGTTTTGTGGAATCTTGAGTATGCATTGCAGCTTCAAGAGACATCATCAGCCCTCATGGAGCCCGAAGATAACAGCACAAACCACATCACTGGAATTCAATTGACACCCCTAGATCATTTTGATAACAGTGTGAGTATGATTGATGGGGGCAACTCTTGCACAGATGATGATGCAGAAGATGCTGCTACAAGTGCAGTGTTCTCACAATTGGTAAATCCCCGTGGAAGATAA 2529 0.4377 MELKKWVPCVVVFIFLLLVNGSFSLYTPPDSYLIACGSSQNITFQGRTFVPDSQHSSLVMKTGNSFVASTNSSAPFPIYQSARVFTEKASYRFEIQQEGRHWVRLYFSPIPNSGHNLTSASLTVVTDKFVLLSNFTFRKYNGSYMFKEYAINVTSDTLDVTFIPSNGSAAFVNGIEVVSMPNELFVDQALAVNPPAPFNGLSELAFETVYRLNMGGPLITSENDTLGRTWLNDRKYLHVNSSVLNVSVNPSSIKYPVAVRPETAPNWVYATAEAMGDANVNDPNFNITWVFNVDPNFSYFIRAHFCDIMSKSLNTLVFNVFINSDIALQSLDLSTITNDLAVPYYRDFVANASADSNTLTVSVGPDTVADFPNATMNGLEIMKISNSLRSLDGLYSVDTLLPGSHSKKSMVGVIVGSAVGALAAVAIVGLCYCCLVRGKSKSSNQQGHSWLPLPLYGNSLTMTKNSTISQKSGTASCISLASTNLGRFFSFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTPLDHFDNSVSMIDGGNSCTDDDAEDAATSAVFSQLVNPRGR* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01571 842 FunFam Receptor-like protein kinase FERONIA 577 793 - -
Lapu11g01571 842 PANTHER OS07G0166700 PROTEIN 487 778 IPR045272 GO:0004714|GO:0006468
Lapu11g01571 842 FunFam receptor-like protein kinase FERONIA 463 576 - -
Lapu11g01571 842 Gene3D Phosphorylase Kinase; domain 1 460 576 - -
Lapu11g01571 842 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Lapu11g01571 842 FunFam Receptor-like protein kinase FERONIA 205 386 - -
Lapu11g01571 842 SUPERFAMILY Protein kinase-like (PK-like) 480 772 IPR011009 -
Lapu11g01571 842 Gene3D - 204 386 - -
Lapu11g01571 842 Gene3D - 31 181 - -
Lapu11g01571 842 Pfam Malectin-like domain 34 384 IPR024788 -
Lapu11g01571 842 Pfam Protein tyrosine and serine/threonine kinase 506 768 IPR001245 GO:0004672|GO:0006468
Lapu11g01571 842 ProSiteProfiles Protein kinase domain profile. 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01571 842 FunFam Putative receptor-like protein kinase 31 181 - -
Lapu11g01571 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Lapu11g01571 842 CDD STKc_IRAK 507 772 - -
Lapu11g01571 842 SMART serkin_6 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01571 842 Gene3D Transferase(Phosphotransferase) domain 1 577 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01571 Lapu-Chr11 21879489 21883218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01571 2 842 Receptor kinase-like Gene Family AT3G46290 52.872 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu11g01571 Malectin_like 2.4e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01571 - - gmx:100809700 1558.89