Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01556 ATGGACAGCACCGAAGACTCATCAACGAGTTCACAACAACAACCAAACCTCCCACCCGGGTTTCGGTTCCACCCCACAGACGAAGAGCTCGTGGTTCACTACCTCAAGAAGAAAGTTGATTCTGTTCCTCTCCCTGTTTCAATCATCGCTGATGTTGATCTCTACAAGTTTGATCCCTGGGAATTACCAGCTAAGGCATCGTTTGGGGAGGAAGAGTGGTACTTTTTCAGTCCAAGAGATAGGAAGTACCCAAATGGCGCGAGGCCAAACAGGGCTGCAACTTCAGGGTACTGGAAGGCCACTGGGACAGATAAACCCATATGCAGTGGAACTCAAAAGGTTGGGGTGAAGAAATCTTTGGTTTTCTATGGCGGGAAGCCACCAAAAGGGGTCAAAACCGATTGGATCATGCATGAGTATCGTCTTGCTGAAACCAAGCCTAACAACAGGCCTCCTGGGTGTGACTTGGGCCACAAGAAAAACTCCCTAAGGCTGGATGATTGGGTGTTGTGCCGGATCTACAAGAAGGGCAACTCACAAAGGTCACCTATGGAGCATGAGAGGGATGATTCCATGGATGACATGATTGGAGAAGTACCTCCTTCCATCAACGTGGGCCACATGAATGCGAGATTTCACCTTTCAAAGATGTCTACGAGCTACAGTGGTGCATTGTTGGAAAATGACAGAAACACGTTAGAAGGGGTGGTTATAGGCAATGGTGTGAATGGGATCAGCACTACTACAAGTGCCATACCATCTCAGTTTGGCACTTCAAACTCCAAGGCAGATCACCTTCCTTTTGCCCTTTCAAACACCACCTCAGCCTCCAAAAGAACCCTCTCAACACTGTATAACTGGAATGATGATAGCGATGAAAAACAGTTCAATTTGGACAGTAATGGGAACGTGAGTGTTGTGAGGACTGAAGAGAACAATGGTACTCCTGGCTCCTTTGCCACTCTGCTTAACCAGCTCCCACAAACACCTTCATTGCCCCAAATAGGGTCTATGGGAGATGGCTTACTTAGGACACAGTATCAAATACAAGGGACTAATTGGTATGGTTAA 1071 0.4725 MDSTEDSSTSSQQQPNLPPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPWELPAKASFGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPICSGTQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRLAETKPNNRPPGCDLGHKKNSLRLDDWVLCRIYKKGNSQRSPMEHERDDSMDDMIGEVPPSINVGHMNARFHLSKMSTSYSGALLENDRNTLEGVVIGNGVNGISTTTSAIPSQFGTSNSKADHLPFALSNTTSASKRTLSTLYNWNDDSDEKQFNLDSNGNVSVVRTEENNGTPGSFATLLNQLPQTPSLPQIGSMGDGLLRTQYQIQGTNWYG* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01556 356 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Lapu11g01556 356 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Lapu11g01556 356 FunFam NAC transcription factor 56 26 181 - -
Lapu11g01556 356 MobiDBLite consensus disorder prediction 1 22 - -
Lapu11g01556 356 MobiDBLite consensus disorder prediction 1 19 - -
Lapu11g01556 356 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Lapu11g01556 356 Gene3D NAC domain 26 181 IPR036093 GO:0003677|GO:0006355
Lapu11g01556 356 PANTHER NAC TRANSCRIPTION FACTOR 56 17 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01556 Lapu-Chr11 21255559 21258723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01556 1 355 NAC Transcription Factor Family AT3G15510 52.381 3.70e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu11g01556 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01556 - - gmx:100811670 607.831