Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01535 ATGATGTTATCGGCTTCGCCATGTTCCTTGGCGAGAAGCTCGCTGGAGGAGATGCTGGATTCACTTCGGCGGAGGGACGAGGAGGAGGAGAAGAAGAAGGACTTGCCACCGGCGTTGCCCGCCAGGCCGGCCTCGCGTGCAAGGCTTCCTACGTCACGGCGGTCGCTGCCGAACAATTTTAAGGTTAGCGGCAGCGAGCGCCATGTCGTGCTGGAGAACGAAGTTGCTACAAATGAGGAGAGTGAGGTGAAGGAGAAGGATTTGGGGCAGAAGAGGAGTAGGTGTGGTTTTGGGAGCAAGAGGGTGAAGAAGGATGTGGAGTCTCCTTATGTGGCACTTTCTTCCAGTGATTCATCAGGGAAGGTTTGGGAATTGGAGGGTGATGATAGCATATCATATTTCATAAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAGCTAGGAATGATACAGTCAACTTCAGGAGAGGAAGCATCCGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGACAGATCAGAGATTCTACCAGCAAATCCTGATGTTTTGGAGGATGTGGATGATCTCATTAAACTTGGTTATTTGAACGAGCCATCGGTTCTTCACAATCTTAAATTAAGATATTCTCAAGGGATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCGCTCAATCCTTTCAAAGATCTTCAGATGTATGGAAAGGATTATGTGTCAGCTTGTAGCCAGAGAACCATGAATAGTCCTCATGTTTATGCTATGGCAGATGCAGCTTATAACAAGATGATGAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCACTGCAATACTTAGCCGCTCTTGGTGGTGGTGGTAATTGTGAGATAGAAAAGGAATTTCTTCAGATAAATCGTATTTTAGAGGCTTTTGGGAATGCAAAAACATCCAGGAATGACAACTCTAGTAGATTTGGGAAGTTGATTGAAATTCACTTCAGCTGCACGGGTAAAATATGTGGGGCTAAAATTCAAACCTTATTGTTGGAAAAGTCCAGAGTTGTTCAACTGGCCCGTGGTGAGAGATCATATCACATTTTTTATCAACTCTGTGGTGGATCTTCATCTGATCTTAAAGAGAAACTGAATCTTAGAGCAGTCAGTGAATATAAATATCTAGTTCAGAGTGACTGCATGTCAGTTGATGGTATTGATGATGCCAAAAGCTTTGATCAGCTGCTGGAAGCACTGGATGCTGTTCGAATTTGTCAAGAGGATCAGGAACTGATCTTTAAGATGCTTGCTGCAATACTATGGTTGGGAAATATATCATTCCAAGTAGACAGAGAAAATCACATTGAGGTTGTTGAGGATGAAGCTGTAACCAGTGCTGCCCAGCTGATGGGTTGCAGATCCCAGGAATTAATGACAGCGTTATGTACCCATAAAATCCAAGCTGATGAAGATACTATTTCCAAAAAATTGACATTGAGGCTGGCAATCCAAAGAAGAGATGCAATTGCAAAATTTATCTATGCAAGCTTGTTTAACTGGCTCTTGGACCAAGTTAACAAGTCACTTGAAGTGGGTAAAAATTGTACCGGGAAATCCATAAGTATCCTGGATCTTTATGGGTTTCAGACTTTCCAGAAGAATGGCTTCGAGCAGTTTTATATAAATTATGCCAATGAAAGGATTCAACAACATTTTAATCGCCATCTGTTTAAACTCGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGTGTGCTTGGATCTATTTGAGAAGAAACCTCAAGGTCTACTCTCTTTGTTGGATGAGGAGTCAAATTTACCCAACGCGTCTGATTTAACATTTGCCAACAAACTTAAGCATCACTTGCACCCTAATCCTTGCTTCAAAGGGGAAAGAGGCAGAGCTTTCCATGTTCGTCACTATGCAGGAGAGGTTCTGTATGATACAAATGACTTTTTAGAAAAGAACAGAGACGCGATGTCTTCTGACTGCATTCAATTCCTGTCATCATGTAATTGTGAACTGCTGCAGTTGTTCTCCAAAATGTTTAACCAGTCTCAAATGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACAATGCCTCACTTTATTCGCTGCATAGCACCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAGGCCTTGTCCTACAACAACTCAGGTGTTGTGGAGTTGTAGAAGTCGTTAGACTTTCAAGGGCTGGATATCCTACTCGAATGACCCATCAAGAGTTTTCTAGAAGGTATGCGTTTATGCTTTCTGAGGCTGCTGTATCCCATGATCCATTGAGCGTCTCAGTTGCTGTTCTGCAAAAATTTAGTATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGATGCACTGGAGAATATGAGAAGCCAGATTTTGCGGGGAATACTAGGGATTCAAAAATGTTTCCGTGGTCATCAAGCTCGTGGTTGTTTCTGTGAACTTAAGAATGGAGTGACAACATTACAATCATTTATTCGTGGAGAAAATACGAGAAGGAAATATGGTGTTGCAGCAAAGTCGTCAATAACAATTCATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGGTGCTAGTCATGTAAATAGGTCAAAGAAATATCCTGAAAATGCTAGATCCAGGCGGAAGTCTTTTATGAAGATAATACCAGAAGTACAGGATTTGTCCAAAGAGCCAGTTCAGAATCTGCTTTCAGCTTTAGCAGAACTCCGAAGGCAGGTTGACAAGGCTGATGCAATCGTAGAGCAAAAGGAAGAGGAATATACTGAGTTAAGGGAACAGCTAAAGCAATCAGAGAGAAAGAGGATTGAATATGAGACAAAAATGAAGTCAATGGAGGAGGCTTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTCCTGAGAACGCTACTGTTCAACCTGTAAGACATGATTTTGTGTTACCTCGTGGTTATGATTCTGAAGATACGTCCATGGGATCTCGAACTCCAGGTGGGAGCACACCAATGCTTTCTGGCAGTCTGTCTATCCCTGATGTAGGGAGAGAGGTCAATGGCACTTTGACTACAGTCAGCAATCTGATGAAGGAATTCGAGCAGCGAACACAGAACTTTGATGATGAAGTAAAATCATTGAACGATGTTAAACCGGGGCAGTGTGCAAACACAAATTCCGTTGAAGAACTTCGGAAACTTAAACAGAGATTTGAAGGGTGGAAGAAACAATACAAGATTAGATTACGTGAGACTAAGGCAAGGCTTCATAAATCAGAATCAGATAAAAGTTGGCGAACTTGGTGGGGGAAGTTAGGCTCGAGAGCATAA 3537 0.4218 MMLSASPCSLARSSLEEMLDSLRRRDEEEEKKKDLPPALPARPASRARLPTSRRSLPNNFKVSGSERHVVLENEVATNEESEVKEKDLGQKRSRCGFGSKRVKKDVESPYVALSSSDSSGKVWELEGDDSISYFIKKKLRVWCRQPRGQWELGMIQSTSGEEASVSLSNGNVMKVDRSEILPANPDVLEDVDDLIKLGYLNEPSVLHNLKLRYSQGMIYSKAGPILIALNPFKDLQMYGKDYVSACSQRTMNSPHVYAMADAAYNKMMRDEVNQSIIISGESGSGKTETAKIALQYLAALGGGGNCEIEKEFLQINRILEAFGNAKTSRNDNSSRFGKLIEIHFSCTGKICGAKIQTLLLEKSRVVQLARGERSYHIFYQLCGGSSSDLKEKLNLRAVSEYKYLVQSDCMSVDGIDDAKSFDQLLEALDAVRICQEDQELIFKMLAAILWLGNISFQVDRENHIEVVEDEAVTSAAQLMGCRSQELMTALCTHKIQADEDTISKKLTLRLAIQRRDAIAKFIYASLFNWLLDQVNKSLEVGKNCTGKSISILDLYGFQTFQKNGFEQFYINYANERIQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNQVCLDLFEKKPQGLLSLLDEESNLPNASDLTFANKLKHHLHPNPCFKGERGRAFHVRHYAGEVLYDTNDFLEKNRDAMSSDCIQFLSSCNCELLQLFSKMFNQSQMQSVATKFKVQLFKLMHQLESTMPHFIRCIAPNTKQLPGIYDEGLVLQQLRCCGVVEVVRLSRAGYPTRMTHQEFSRRYAFMLSEAAVSHDPLSVSVAVLQKFSIPSEMYHVGYTKLYLRAGQIDALENMRSQILRGILGIQKCFRGHQARGCFCELKNGVTTLQSFIRGENTRRKYGVAAKSSITIHSRKLEEIHAIILLQSVIRGWLVRRGASHVNRSKKYPENARSRRKSFMKIIPEVQDLSKEPVQNLLSALAELRRQVDKADAIVEQKEEEYTELREQLKQSERKRIEYETKMKSMEEAWQKQMASLQMSLVAARKSLAPENATVQPVRHDFVLPRGYDSEDTSMGSRTPGGSTPMLSGSLSIPDVGREVNGTLTTVSNLMKEFEQRTQNFDDEVKSLNDVKPGQCANTNSVEELRKLKQRFEGWKKQYKIRLRETKARLHKSESDKSWRTWWGKLGSRA* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01535 1178 Coils Coil 1099 1119 - -
Lapu11g01535 1178 Gene3D - 373 429 - -
Lapu11g01535 1178 ProSiteProfiles Myosin motor domain profile. 189 845 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 Pfam IQ calmodulin-binding motif 874 890 IPR000048 GO:0005515
Lapu11g01535 1178 Pfam IQ calmodulin-binding motif 909 925 IPR000048 GO:0005515
Lapu11g01535 1178 PRINTS Myosin heavy chain signature 548 576 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 PRINTS Myosin heavy chain signature 317 344 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 PRINTS Myosin heavy chain signature 273 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 PRINTS Myosin heavy chain signature 601 629 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 PRINTS Myosin heavy chain signature 219 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 MobiDBLite consensus disorder prediction 20 37 - -
Lapu11g01535 1178 CDD MYSc_Myo8 203 833 IPR036022 -
Lapu11g01535 1178 ProSiteProfiles IQ motif profile. 907 935 IPR000048 GO:0005515
Lapu11g01535 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 925 IPR027417 -
Lapu11g01535 1178 Gene3D - 779 846 - -
Lapu11g01535 1178 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 Gene3D - 851 896 - -
Lapu11g01535 1178 MobiDBLite consensus disorder prediction 1053 1083 - -
Lapu11g01535 1178 Gene3D - 560 735 - -
Lapu11g01535 1178 ProSiteProfiles IQ motif profile. 849 876 IPR000048 GO:0005515
Lapu11g01535 1178 MobiDBLite consensus disorder prediction 20 60 - -
Lapu11g01535 1178 Gene3D Myosin VI head, motor domain, U50 subdomain 430 537 - -
Lapu11g01535 1178 FunFam Myosin heavy chain 373 429 - -
Lapu11g01535 1178 Coils Coil 12 32 - -
Lapu11g01535 1178 SMART MYSc_2a 183 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 MobiDBLite consensus disorder prediction 1060 1078 - -
Lapu11g01535 1178 SMART iq_5 846 868 IPR000048 GO:0005515
Lapu11g01535 1178 SMART iq_5 869 891 IPR000048 GO:0005515
Lapu11g01535 1178 SMART iq_5 906 928 IPR000048 GO:0005515
Lapu11g01535 1178 ProSiteProfiles IQ motif profile. 870 899 IPR000048 GO:0005515
Lapu11g01535 1178 PANTHER MYOSIN 182 1164 - -
Lapu11g01535 1178 Gene3D Kinesin motor domain 188 778 IPR036961 -
Lapu11g01535 1178 Pfam Myosin head (motor domain) 191 833 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu11g01535 1178 Coils Coil 962 1017 - -
Lapu11g01535 1178 Coils Coil 1144 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01535 Lapu-Chr11 20413509 20430126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01535 1 1175 Myosins gene family AT5G54280 58.435 0.0 1401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01535 K10357 - gmx:100802074 1905.18