Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01528 ATGTCTACAACTTCCTCTTCGTTAGACAGTTTAGCAGTGAGTCAATCCATCCAAGACGGTAAGAATGAGACTTTGGTTTCAGCAGGGGGAATTACTGAACTGGGTTTCTTTAGTCCAGGAAATTCAGCAAGAAGATACTTGGGTATATGGTACACAAATGTATTCCCTTTCACTGTGGTATGGGTGGCTAACCGAAATACACCACTTGAGAATAACTCAGGAGTTCTCAAACTCAACCAAAAAGGGATTCTTGTACTTCTCAATGGCACAAACAACATCATTTGGTCATCAACCAACATATCAAGCAATACAGTGAATGATCCAGTAGCTCGTCTCTTGGATTCCGGAAATTTTGAAGTGAGAAATGGACGGGAAACAAACGAGGATAGCGTCTTGTGGCAGAGTTTTGATTATCCGGGTGATACACACATGCCAGAGGTGAAGCTTGGATGGAACCTAGAGAGTGGTGTAGAAAGATATATAGCATCTTGGAAAAGTGATGACGATCCTGCAGAGGGAGAATATGTTCTAAAAGTGGATCTTAGAGGATATCCTCAAATAATGAAGTTCAAGGGAGGCGATATAAAAGCGAGAGCAGGGTCATGGAATGGCTTGTCTCTAGTTGGAAATCCTATTCCAGCTCGTGGTACGGCAGCAAAATTTGTGTTCAATGAAAAAGAGGTGTATTTTTGGTACAGTCTTGTTGGTGGATTGGACTTCTTTGTGTACACACTGACCCCTTCAGGCACAGGACAAAGTTGGTTTTGGACAACTGAAACAAGAACACGGCAAGTGATCTCAACTGGGGAGCAAGATGAATGCGAGAATTATGCCTTTTGTGGTGCAAATTCTGTTTGCATTTATGATGGTAACTATCCAATTTGTGAATGCCTGAGAGGATATGCTCCCAAGTCTCCTGATCAGTGGAATATATCAATTTGGCACGATGGCTGTGTCCCAAAGAATAAATCTAACTGCACAAACAGGTATACAGATGGCTTCTTGAAATATACGCACATGAAGTTGCCAGACACTTCTTCATCATGGTTTGATGCAAGCATGAACCTTGATGAATGTAAGAAGTTGTGTATTAAAAACTGTTCTTGTACAGCATGTGCAAATTTAGATGTCAGTGATGAAGGAAGTGGTTGCCTGCTATGGTTTAATGATCTGGTTGACATGAGGAATTTCTCTCAATGGGGACAAGACTTACACATCAGGGTCCCTGCTTCCGAATTAGATCATGCTGGCCATGAAAACATCACGATAAAGATAATTGCAATTACGGTTGGTGTGATTATATTCGGATTAGTGACATGCATATTTATAAGAAAAAATCCAGGGATGTCTAGAAGAATTTATAGAAAGCATTACAAAATTAAACAGAAAAAGGAAGACCTTGAATTTCCAACTTTCGATTGGCCGGTCATTGCTAATGCTACTGAAAACTTTTCAACCAAAAACAAGCTTGGTGAAGGTGGCTTTGGACCAGTGTACAAGGGTACAATGATAGATGGACAAGAGTTAGCAGTAAAAAGACTCTCAGAAAATTCCGGACAAGGATTAGAAGAGTTCAAAAATGAAGTAGTATTGATTGCAAAACTTCAGCACCGTAATCTTGTAAAGCTTCTGGGTTGTTGCATTGAAAGAGAAGAAAAAATGTTAATTTATGAATACATGGCAAACAAAAGTTTGGACTTCTTTGTTTTTGATGAAACCAAAAGGAAGTTGCTAGATTGGCCCATACGATTCAACATTATCAGTGGCATTGCCCGAGGACTTCTGTATCTTCATCAAGATTCTAGATTAAGGATTATTCACAGAGATCTCAAAACTAGCAATATATTATTAGATGCAAATTTGGATCCCAAAATAGCAGACTTTGGCTTGGCTCGATCATTTTTGGGAGATCAAGTCGAGGGAAAGACACACAGGGTGGCTGGAACATATGAAAAAATTATTTTCAGTGGATACATGCCTCCTGAGTATGTTACACGTGGCCATTTTTCAGTGAAATCAGATGTGTTTAGTTATGGTGTGATAGTACTAGAGATTGTAAGTGGGAAGAAAAACAGAGAATTTTCAGACCCAGAAAACAACAATAATCTTCTTGGTCATGCATGGAGATTGTGGACTCAAGAACGAGGACTTGAATTGCTTGATGAAATGATAGGAGAACAATGCCTTCCATCTGAAGTCACACGGTGCATACAAGTAGGCCTACTATGTGTGCAACAAAGAGCAAAAGATAGGCCAGACATGTCATCAGTGGTTCTAATGTTGAATGGTGAAAAATTATTACCAAAGCCAAACATTCCTGGCTTTTACACTGAATCAAATGTTAAAACTGAAGCAAGTTCTTCGTCGGAAAATCACACACTATGCTCAGTTAATGAACTTTCCATCACAACGATGGATGCAAGATAG 2427 0.3951 MSTTSSSLDSLAVSQSIQDGKNETLVSAGGITELGFFSPGNSARRYLGIWYTNVFPFTVVWVANRNTPLENNSGVLKLNQKGILVLLNGTNNIIWSSTNISSNTVNDPVARLLDSGNFEVRNGRETNEDSVLWQSFDYPGDTHMPEVKLGWNLESGVERYIASWKSDDDPAEGEYVLKVDLRGYPQIMKFKGGDIKARAGSWNGLSLVGNPIPARGTAAKFVFNEKEVYFWYSLVGGLDFFVYTLTPSGTGQSWFWTTETRTRQVISTGEQDECENYAFCGANSVCIYDGNYPICECLRGYAPKSPDQWNISIWHDGCVPKNKSNCTNRYTDGFLKYTHMKLPDTSSSWFDASMNLDECKKLCIKNCSCTACANLDVSDEGSGCLLWFNDLVDMRNFSQWGQDLHIRVPASELDHAGHENITIKIIAITVGVIIFGLVTCIFIRKNPGMSRRIYRKHYKIKQKKEDLEFPTFDWPVIANATENFSTKNKLGEGGFGPVYKGTMIDGQELAVKRLSENSGQGLEEFKNEVVLIAKLQHRNLVKLLGCCIEREEKMLIYEYMANKSLDFFVFDETKRKLLDWPIRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKIADFGLARSFLGDQVEGKTHRVAGTYEKIIFSGYMPPEYVTRGHFSVKSDVFSYGVIVLEIVSGKKNREFSDPENNNNLLGHAWRLWTQERGLELLDEMIGEQCLPSEVTRCIQVGLLCVQQRAKDRPDMSSVVLMLNGEKLLPKPNIPGFYTESNVKTEASSSSENHTLCSVNELSITTMDAR* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01528 808 Pfam PAN-like domain 328 394 IPR003609 -
Lapu11g01528 808 CDD PAN_AP_plant 323 409 - -
Lapu11g01528 808 Gene3D - 2 136 IPR036426 -
Lapu11g01528 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 136 - -
Lapu11g01528 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Lapu11g01528 808 ProSiteProfiles EGF-like domain profile. 270 307 IPR000742 -
Lapu11g01528 808 Pfam Domain of unknown function (DUF3403) 767 808 IPR021820 GO:0004674
Lapu11g01528 808 PIRSF SRK 1 808 IPR024171 GO:0004674
Lapu11g01528 808 Pfam S-locus glycoprotein domain 198 305 IPR000858 GO:0048544
Lapu11g01528 808 CDD B_lectin 20 139 IPR001480 -
Lapu11g01528 808 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 751 - -
Lapu11g01528 808 Gene3D Phosphorylase Kinase; domain 1 457 559 - -
Lapu11g01528 808 Gene3D Transferase(Phosphotransferase) domain 1 560 768 - -
Lapu11g01528 808 SUPERFAMILY Protein kinase-like (PK-like) 467 787 IPR011009 -
Lapu11g01528 808 SMART blect_4 16 139 IPR001480 -
Lapu11g01528 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 170 IPR036426 -
Lapu11g01528 808 CDD EGF_CA 272 301 - -
Lapu11g01528 808 Pfam Protein tyrosine and serine/threonine kinase 486 759 IPR001245 GO:0004672|GO:0006468
Lapu11g01528 808 SMART serkin_6 484 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01528 808 Gene3D Hepatocyte Growth Factor 325 406 - -
Lapu11g01528 808 CDD STKc_IRAK 490 763 - -
Lapu11g01528 808 SMART ntp_6 329 408 IPR003609 -
Lapu11g01528 808 Pfam D-mannose binding lectin 58 165 IPR001480 -
Lapu11g01528 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 449 559 - -
Lapu11g01528 808 ProSiteProfiles Bulb-type lectin domain profile. 10 133 IPR001480 -
Lapu11g01528 808 ProSiteProfiles Protein kinase domain profile. 484 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01528 808 FunFam - 560 770 - -
Lapu11g01528 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 325 408 - -
Lapu11g01528 808 ProSiteProfiles PAN/Apple domain profile. 326 409 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01528 Lapu-Chr11 20145027 20148037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01528 472 808 Receptor kinase-like Gene Family AT4G23140 54.678 8.72e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01528 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01528 - - gmx:100815430 1257.28