Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01523 ATGGATGAGGTATCATGTGTGTTGTGTGGGAAGCGGGCGATGATGCTCTGTGAGTCGGACCAGGCTAAGCTGTGCTGGGAGTGCGACGAGAAAGTCCACAGCGCGAATTTCTTGGTCGCAAAACATTCGAGGGTTCTTCTGTGTCGTTTGTGTCACTCCCCCACTCCGTGGACGGCTTCAGGCACGAAACTCACGCCTACCGTGTCGTTTTGTCACCCTTGCGTCGTGCGTCGACACGCACGGTTGAACCACTTGGTGCGTAGTGATCAACGGCACAGTGTGAACGATGATGAGGAACAAGGTTCTGATCGCGTTCTTGATTATGATGATGATGATAATAGTGATTGCACTGAAGAAGAAGAAGAAGAAGAAGAAGATAATGAAGACGAAGATGAAGAAGGAGAAAATCAAGTGGTTCCAATGTCTTCTGGTTCTGCCACGTCACCTCACAGTGACGACGATTCAGGTTTAGCTTTCAAGCGGTTAAGAAACAACTCTTTTGGTTTTGATTCTCATGATGATACAGCATGTTCTTCATCTGAGATTCTCAGTGCTACATTGCCCAATAATGATGAATCAACCTCAACGAGTGTCTCCGGGGCATTGAAGAGGCATCGAGTTGATCAACGAAATTATGATTAA 642 0.4688 MDEVSCVLCGKRAMMLCESDQAKLCWECDEKVHSANFLVAKHSRVLLCRLCHSPTPWTASGTKLTPTVSFCHPCVVRRHARLNHLVRSDQRHSVNDDEEQGSDRVLDYDDDDNSDCTEEEEEEEEDNEDEDEEGENQVVPMSSGSATSPHSDDDSGLAFKRLRNNSFGFDSHDDTACSSSEILSATLPNNDESTSTSVSGALKRHRVDQRNYD* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01523 213 MobiDBLite consensus disorder prediction 138 152 - -
Lapu11g01523 213 Coils Coil 113 133 - -
Lapu11g01523 213 MobiDBLite consensus disorder prediction 102 136 - -
Lapu11g01523 213 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lapu11g01523 213 CDD Bbox1_BBX-like 6 47 - -
Lapu11g01523 213 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 183 - -
Lapu11g01523 213 Pfam B-box zinc finger 3 46 IPR000315 GO:0008270
Lapu11g01523 213 MobiDBLite consensus disorder prediction 184 213 - -
Lapu11g01523 213 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lapu11g01523 213 MobiDBLite consensus disorder prediction 184 202 - -
Lapu11g01523 213 MobiDBLite consensus disorder prediction 89 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01523 Lapu-Chr11 19973660 19976262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01523 1 99 C2C2-CO-like Transcription Factor Family AT5G54470 54.545 7.70e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01523 - - gmx:100818267 247.669