Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01519 ATGTTGATTTATGAATTTATGCCTAATAAAAGCTTGGATCTTTTCCTTTTTGATCCAATTAGAAAACAGATGCTAGATTGGGGAACAAGAGTCAGAATAATTGATGGGATTGCCCAAGGAATTCTTTATCTTCATCAGTATTCCAGGTTCAGGATCATTCACAGAGATTTAAAAGCTAGCAACATATTGTTGGACAGCAACATGAATCCTAAAATATCAGACTTTGGAATGGCAAGAATATTTGGTGAGAATGAACATCAAGCAAATACAAACAGAATAGTTGGAACATATGGTTACATGTCACCTGAATATGCTATAGAAGGACTTTTCTCCATAAAATCGGACGTATTTAGTTTTGGGGTTCTTTTGTTGGAGATTGTAAGTGGGAAGAAGAATACTGGCTTTTATCAAACAACTTCCTTCAATCTTCTTGGATATGCTTGGGATCTTTGGACTAGCAATTTGGGAATGGATCTCATGGATACTGGACTAGATGATATTAGTACTAGTATGCATACTGTGCCAAGATATGTGAACATAGGACTTCTTTGTGTTCAAGAAAGTCCAGAAGATAGGCCAACCATGTCTGATATTGTATCAATGATTGGAAATGACACTGTACCCCTTCCTTCACCTAAACCACCTGCATTTCTAAAGGTGAGAGGTGATGATATTTCAACATTGCCTAGTAGCATGACAGAAAGATTTTCTGTGAATGTTATTACAGATACAATTCTGGAAGCAAGATGA 750 0.3627 MLIYEFMPNKSLDLFLFDPIRKQMLDWGTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDSNMNPKISDFGMARIFGENEHQANTNRIVGTYGYMSPEYAIEGLFSIKSDVFSFGVLLLEIVSGKKNTGFYQTTSFNLLGYAWDLWTSNLGMDLMDTGLDDISTSMHTVPRYVNIGLLCVQESPEDRPTMSDIVSMIGNDTVPLPSPKPPAFLKVRGDDISTLPSSMTERFSVNVITDTILEAR* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01519 249 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01519 249 Pfam Domain of unknown function (DUF3403) 204 249 IPR021820 GO:0004674
Lapu11g01519 249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Lapu11g01519 249 Gene3D Transferase(Phosphotransferase) domain 1 7 207 - -
Lapu11g01519 249 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 227 - -
Lapu11g01519 249 PIRSF ILK 1 141 - -
Lapu11g01519 249 PIRSF ILK 169 204 - -
Lapu11g01519 249 SMART serkin_6 2 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01519 249 Pfam Protein tyrosine and serine/threonine kinase 1 201 IPR001245 GO:0004672|GO:0006468
Lapu11g01519 249 SUPERFAMILY Protein kinase-like (PK-like) 1 232 IPR011009 -
Lapu11g01519 249 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 7 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01519 Lapu-Chr11 19660222 19664946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01519 1 217 Receptor kinase-like Gene Family AT4G23230 58.716 3.44e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01519 PK_Tyr_Ser-Thr 1.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01519 - - pvu:PHAVU_011G149500g 434.876