Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01518 ATGGATACTATAGCGAGCGTGGCATCAAGCGTGGCTGTACCTCTGCTGCGAAACATCACCTACGTGTTGATGTACAACACTTACCTGACGGAGCTGGAAACCGAGATTCAGAGGCTACAGAGTGAAGAAAAGGAAGTGAGGCACACGGTTGAAGCTGCCAAAAGGGGTGGTGAAGAGATCGAAGACACCGTGCGTGACTGGTTTGACCGAGTGCGTGCAGCTGTGGAGCAGGGGCAGGCTTTCCTTCAGGAGGAAGAGAGGGAAAGGGTTGGGTGCATGGACGTGTACTTGAAGTACACCAACAGCCAGAGAGCAAGAACCTTGGTGGAGATTTTGAGGGAGATAAGGAGAGAGACGTTCGATCGTGTTTCCTATAGGTGTGCCTTGAGATGCAATGTTGGCCCTGCTGCCAGAGAGTATGTTGCTATTCAATCGAGAACGGTGATTTTGAATGATGTTGTGAAGGTGCTGAAGGATGGTGGGGTTGACATTGTTGGAGTGTATGGGGTGGCTGGCGTGGGGAAGACTGCATTGGTGAAGGAATTGGCCTGGCAGGTTGAGAAGGATGGCTTGTTTGACGCGGTGGTGGTGGCCACAGTGACGGATTCGCCGGATGTGGGAAGGATACGAAATGAAATTGCTGATGGGTTGGGGTTGAAGTTTGATGAGCTGACGGAGCTGGGGCGAGCGAGCCGGTTGCGCCAGAGGATCCGGCAGGAGCAGAGGATTCTTGTGGTGTTGGATGATGTGTGGGGGAAACTAGATTTGACAAAGGTTGGTGTGCCTTTTGGTGAGGACTACAAAGGTTGCAAATGCCAGTTGTTGATTACATCAAGGAATCTTAATGTGTTGAGTACTAATTTTGGGGTAGAGAAGGTTTATAGGCTTGAGGTTTTGTCTGAGGATGAGAGTTGGGAGTTGTTTGAGAAGAGGGGAGGGGATATGGTTAGGGATCCCAGCATTCAACCAGTGGCCGAAAAAGTAGCGAAGAGCTGTGATGGATTGCCTCTTCTGATAGTCACAGTGGTGGAGGAATTGAAGAACAAGGATTTATATGCTTGGAAGGATGCACTGGAGCAGATAACAAGTTTTGAACTTGAAGGGCGTCTTTATTCTCCTGTGCGTTCTGCTATTGAGCTGAGTTATGACCATTTGGAAAGTCAGGAACTGAAAACTTTCTTCCTGCTTTTGGGTTCCATGGGAAATGGTTGTAGCACAAGAGATTTGTTGGTGTTTGGTTGGTGCCTGGGACTGCACAAACATGTTGATTCATTGGCAGATGGGAGAAATAGGCTTTACAAATTGATAGACAACCTGAGAGCTGCTTGTTTGTTACTTGATGAGGGGAAAAGAGATTCAGTTGTGGCTCTTGAGGTGGTTCGACATGTGGCTGCCTCTATTGCATCCAGTGTCAAACCTTTCTTTACAGTGCAGAGAAACAAGGAATTGAAATGGCCCAGAATGGATTTTTTCAGAACTTGCCATCATATTTTCTTAGACTGGTGTTATATCCGCGAACTGCCTGAGGTGTTAGAATGTCCCAAGTTGAAGATACTGCAACTAAATAGTCAAGGTAACTATTTGAAAATCCCTGATGATTTCTTTGTTGAGATGAAAGAATTGAAGGTGCTGAGTTTGGGAGGTCTAAATGGTACTCCTTCGCTTCCTCCGTCTCTCAGTCTCTTGACAGACCTCCAAGCATTGTATCTGTGTAAGTGCATGTTGGAAGACATAGCTACTGTTGGGGAAATCACAAGTTTAGAGATTCTCAACTTAGAAAAATCTGAGATTAAAGAGCTCCCTACAGAAATAGGACGATTAAGTAATCTGCGGTTGCTAGATTTGACCGACTGCTCAACACTAGGAGGAATTCCTGGCAACGTGATATCGAGGTTGACAAGCTTGGAAGAGCTCTACATGGGAAACTGTGATGTTCAAGAGGAGGCTAAGGAAAGCAAAAGCCAAAACAATGATTCAAGTCTGAGTGAGTTAAAGCATTTGAATCAAGTAACAACTTTGAATGTGCAGATAGAAGATACTTCAGTTTTTCCTAGAGACATGCTTAGCTTTGGGAGACTAGAAAGCTACAAAATTTTGATTGGGGATGGTTGGAAATGGTCTGGGGTGGAGTCCGAGAATTACAAAACTTCAAGACTTCTTAAGTTAAATTCTGGAGCAGATCCAAGCATTCTAAAGGACTATGGAATAAAGATGTTGATGACCAAGGCTGAAGATTTGCATTTAGCTGAACTAAAGGGTGTTCGAGAAGTACTTTACGAATTGAATGATGAAGGGTTTTCGCATTTGAAGCATCTTTACATTCTAAGCTGTGCTGAAATGGAGAGCATTATTGGCTCAACAGAGTGGGCTTACAGTGATCATGCCTTCCCAAACTTGGAATCATTAATCCTTCACAATCTGATTAACATGGAGAGGATATGCAGTGACCCCCTTCCAGCACAGGGCTTTACTAAACTAAAAGTTGTCAAAGTAAAGGGTTGTGATAAGATGGAGTTTCTTTTCTCTCATTCCATGGTTAAACACCTTTCTGAAATTTTTGAGATTGAGATTTCTGAATGCAAATCTATGACCAATATCCTATCTGGGCAAAGACAAGAGGATGCTGATGCTGGAGAAACGGACAAGATCAGGCTCATCAACTTGCGTTCGCTTACTCTACATTGCTTACCTTCCCTTGTTAGTCTCTCTCCTGAGTCAAGTACTGGGGCTCCTGAAAACGGCAATGGTTTCTCAAGTCAACTTTTTAATGATAAGGTTGAATTTCCAAACTTGGAGACCTTGAAGCTGTATTCAATCAACATCCACAAGATATGGAATAACCAGCTTTCTTACTTTCAAAATTTGACCTCTTTAACCGTAGATGGATGTGAACGGTTGACACATATTTTCTCATACCCTGTGGCTATAAAACTTGTCAAGCTTGAACATCTTTTAATTAGTTCATGCAAATTCGTAGAGAAGATATTTGCGCCGGATGAAAACTTGGGTCACATTCATCATTTTAGAAAATCTGCTCCAACTGAACTGGTTCCAATTTTTCCCAACCTGGAGACATTTGAGATTTCTCAGATGGACAACTTGAAGTCAATATGGCCAGGCCTACTCCCTCAAAAATCCTTTTGTAAACTGAAAAAGATGGAAATCACATCCTGCAACAATCTCTTGAATATGTTCCCATCTCATATGCTAGACAAATTACAAAGACTGGAATCACTGAATTTATGGAACTGTATGGCACTGGAAGTTGTATATGAAATTGATGGTATAAATACAGAGCAAGAGGGTAGCAGTCAAGAAGGGCTGGACATTCCACTCAGAACTTTGTCTTTGGGTAATTTACCAAAGCTAAAGCATTTGTGGAATAAGGATCCTCAGGGAAATATGAGATTTCAAAACCTGTTCATGGTAAAAGCTTCTAAATGTCAAAGTCTAAAATATGTGTTTCCACTGTCTCTAGCCAAAGACCTTCTGCATCTCCAATTCCTTGAGATAAGTGATTGTGGGGTAGAGGAAATTATTGTAAGTGATCAGGGAAAGTTAGAGTCAGCTATTGGGTTTGTTTTCCCAAAATTAGTATCCATAAAAATTTTTAATTTGCCAGAACTTCGATGCTTTTGTAATGGAAATCACAACCTCAGATTTCCATTGTTGAATCTATTTTACGCCGTTGAATGCCCTTCAATGGAGACTTTCTCTCGGGGAATCTTAAGGGCCTCGATCCTTAGAAAAGTACATTTGACTGGGGAAGGAGATCAGTGGTGCTGGGAAGGTGACCTTAATACAACTATAAGAAAGCTTTTCAGTAGAGATCTCGAAGCAAGATTAAGCATTTTATAG 3858 0.4266 MDTIASVASSVAVPLLRNITYVLMYNTYLTELETEIQRLQSEEKEVRHTVEAAKRGGEEIEDTVRDWFDRVRAAVEQGQAFLQEEERERVGCMDVYLKYTNSQRARTLVEILREIRRETFDRVSYRCALRCNVGPAAREYVAIQSRTVILNDVVKVLKDGGVDIVGVYGVAGVGKTALVKELAWQVEKDGLFDAVVVATVTDSPDVGRIRNEIADGLGLKFDELTELGRASRLRQRIRQEQRILVVLDDVWGKLDLTKVGVPFGEDYKGCKCQLLITSRNLNVLSTNFGVEKVYRLEVLSEDESWELFEKRGGDMVRDPSIQPVAEKVAKSCDGLPLLIVTVVEELKNKDLYAWKDALEQITSFELEGRLYSPVRSAIELSYDHLESQELKTFFLLLGSMGNGCSTRDLLVFGWCLGLHKHVDSLADGRNRLYKLIDNLRAACLLLDEGKRDSVVALEVVRHVAASIASSVKPFFTVQRNKELKWPRMDFFRTCHHIFLDWCYIRELPEVLECPKLKILQLNSQGNYLKIPDDFFVEMKELKVLSLGGLNGTPSLPPSLSLLTDLQALYLCKCMLEDIATVGEITSLEILNLEKSEIKELPTEIGRLSNLRLLDLTDCSTLGGIPGNVISRLTSLEELYMGNCDVQEEAKESKSQNNDSSLSELKHLNQVTTLNVQIEDTSVFPRDMLSFGRLESYKILIGDGWKWSGVESENYKTSRLLKLNSGADPSILKDYGIKMLMTKAEDLHLAELKGVREVLYELNDEGFSHLKHLYILSCAEMESIIGSTEWAYSDHAFPNLESLILHNLINMERICSDPLPAQGFTKLKVVKVKGCDKMEFLFSHSMVKHLSEIFEIEISECKSMTNILSGQRQEDADAGETDKIRLINLRSLTLHCLPSLVSLSPESSTGAPENGNGFSSQLFNDKVEFPNLETLKLYSINIHKIWNNQLSYFQNLTSLTVDGCERLTHIFSYPVAIKLVKLEHLLISSCKFVEKIFAPDENLGHIHHFRKSAPTELVPIFPNLETFEISQMDNLKSIWPGLLPQKSFCKLKKMEITSCNNLLNMFPSHMLDKLQRLESLNLWNCMALEVVYEIDGINTEQEGSSQEGLDIPLRTLSLGNLPKLKHLWNKDPQGNMRFQNLFMVKASKCQSLKYVFPLSLAKDLLHLQFLEISDCGVEEIIVSDQGKLESAIGFVFPKLVSIKIFNLPELRCFCNGNHNLRFPLLNLFYAVECPSMETFSRGILRASILRKVHLTGEGDQWCWEGDLNTTIRKLFSRDLEARLSIL* 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01518 1285 Coils Coil 25 49 - -
Lapu11g01518 1285 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1112 1246 - -
Lapu11g01518 1285 Gene3D Ribonuclease Inhibitor 458 724 IPR032675 -
Lapu11g01518 1285 Gene3D Ribonuclease Inhibitor 740 1220 IPR032675 -
Lapu11g01518 1285 SUPERFAMILY L domain-like 491 1166 - -
Lapu11g01518 1285 Gene3D - 298 386 IPR042197 -
Lapu11g01518 1285 PRINTS Disease resistance protein signature 237 251 - -
Lapu11g01518 1285 PRINTS Disease resistance protein signature 332 346 - -
Lapu11g01518 1285 PRINTS Disease resistance protein signature 605 621 - -
Lapu11g01518 1285 PRINTS Disease resistance protein signature 164 179 - -
Lapu11g01518 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 396 IPR027417 -
Lapu11g01518 1285 Pfam NB-ARC domain 151 383 IPR002182 GO:0043531
Lapu11g01518 1285 SUPERFAMILY RNI-like 763 897 - -
Lapu11g01518 1285 Gene3D - 124 291 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01518 Lapu-Chr11 19615508 19619953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01518 139 439 WRKY Transcription Factor Family AT5G45050 27.245 9.31e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01518 - - gmx:100814903 2083.15