Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01516 AGGGTAGCAAGAATAATTTACAGAAAGAATTTCACTCGTAAATTGAGAAAGGAAGGCCTTGATTTGGAAACGTTTGATTTCCCAACCATAGCAAAAGCCACTAAAAACTTTGCAGAAAGTAACAAATTAGGGGAAGGTGGCTTTGGACCTGTGTACAAGGGGATACTCAAGGATGGACAAGAGTTTGCTGTGAAAATGCTCTCAAAAAAGTCAGTTCAAGGATTGGAAGAATTCAGAAATGAAATTGTATTGATTGCTAAACTTCAACATCGTAATCTTGTCAAGCTCATAGGTTGTTGCATTGATGGGAACGAAAGAATGTTGATATATGAATATATGCAA 342 0.3655 RVARIIYRKNFTRKLRKEGLDLETFDFPTIAKATKNFAESNKLGEGGFGPVYKGILKDGQEFAVKMLSKKSVQGLEEFRNEIVLIAKLQHRNLVKLIGCCIDGNERMLIYEYMQ 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01516 114 Gene3D Phosphorylase Kinase; domain 1 3 112 - -
Lapu11g01516 114 Pfam Protein kinase domain 38 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01516 114 SUPERFAMILY Protein kinase-like (PK-like) 22 113 IPR011009 -
Lapu11g01516 114 ProSiteProfiles Protein kinase domain profile. 37 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01516 114 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 114 - -
Lapu11g01516 114 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01516 Lapu-Chr11 19577568 19577987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01516 8 114 Receptor kinase-like Gene Family AT4G23190 54.464 6.20e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01516 Pkinase 9.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01516 - - gmx:100817558 197.978