Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01515 ATGGTGGACAACCTTAGAATGTTATTTACATGGTCCATACTATTATCCAACTTGACAAACTCCACTTTATTGGATAGTTTATCTCCCAGTCAATCAATCCGAGATGGGGAGACATTAGTTTCAGAAGAAGGAACATTTGAAATGGGTTTCTTTTGCCCTGGATCTTCAACAAAACAATACTTGGGTATATGGTATAGGAATGCATCTCCTTCAAAAGTAGTCTGGGTGGCTAACCGAGAAAAATCACTTCAAAATAATTCAGGAGTAGTGAAAATCGATGAAAAAGGAGTCATTATGATTCTCAATGGCAACAAAAACACAATTTGGTGGTCCAACAACACATCAAGGAAAGTAGCAAAGAATCCAATTATGCAACTCTTGGATTCTGGAAATCTTGTGGTGAGAAATGAACGAGATATAAATGAGGACAACTTTTTGTGGCAAAGTTTTGATTATCCATGTGACACATTATTGCCCGGAATGAAACTTGGCTGGAACTTAGTAACTGGTCTAGAGAGGTTTTTGTCATCTTGGAAAAGTGAAGATGATCCTTCCAAGGGAGAATATTATTTGAAACTTGATCTTAGAGGATACCCACAAGTTTTTGGATACAAGGGGGATGTAATAAGATCTAGAGTAGGCTCTTGGAATGGACAAGGTTTGGTGGGTTACCCTATGCGTACACTCGCACCATATGCGAATGAATTGGTGTTTAATGAAAAGGAGGTGTATTATGACTATAGAATCCTAGATAGATCTATTTTCTTCTCAGTTACATTAATGCCTTCCGGGTTTGGGCAAATTTTATTATGGACAAATCAAACAAGGATGGTAAAAGTTCTCTCATTTAGTGATTCAGATCTATGTGAAGAGTATGCTATGTGTGGTACAAATGCTATATGCAACATTGATGGTAATTACTCTCAAACATGTGATTGCATCAAAGGGTATGTTCCAAAGTTCCCAGAACAATGGAACGTATCATATTGGTACAATGGATGTGTCCTAATGAATAAATCTGATTGTAAAAACCACAACACAGATGGCTTCTTTAGGTACACAGGCTTGAAATTACCAGACACTTCTTCATCATGGTTCAGTTCGACCATGAACCTTGAGGCCTGCAAGAAGTCTTGTCTAAAAAACTGTTCTTGTAAAGCATATGCAAATTTGGATATTCGTAATGGAGGAAGTGGGTGCTTACTTTGGTTCGATGATCTGATTGATATGAGACGATTCTCTGAAAGAGGACAAGACATTTACTTTAGAGTCCATACATCATCAAATTTAGATTTGTCAGATCATGTTGCAAGAAATGGCCATGAAAGAAATGGTAAAAGGATTATAGGAATCACAGTTGGTGCAAATATTGTTGGATTAATTGCATGTGTTTGCATAACAATAATTCTAAAAAAGAAAGCAAGAATAATTTACAGAAAGAATTTCACACGTAAACTGAGAGAGGAAGGTCTTGATTTGTCAACATTTGATTTCCCAACCATAGCAAAAGCCACTAAAAACTTTGCAGAGTCTAATAAATTGGGGGAAGGTGGCTTTGGACCTGTGTACAAGGGGATACTTAAGGATGGACAAGAGTTTGCTGTGAAAAGGCTTTCAAAGAAGTCATTTCAAGGGTTGGAGGAGTTTAGAAACGAAGTTGTATTGATTGCCAAACTTCAACACCGTAATCTTGTCAAGCTCATAGATGAAACTAGAAGGATTTTGGTAGATTGGCCTCTACGATTCAACATTATCTGTGGCATTGCTAGAGGGCTTCTTTATCTCCATGAAGACTCAAGATTGAGAATTGTTCATAGAGATCTAAAAACTAGCAATATTTTATTAGATTCAAGTTTAAATCCTAAAATATCAGACTTTGGCTTAGCTAGAACATTATCCGGAGATCAAGTTGAGGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTGCTCGTGGGAACTTCTCATTAAAATCAGATGTCTTTAGTTATGGTGTGATAGTGTTAGAGATTGTTAGTGGCAAGAGGAATAGAGAATTTTCAGATCCAAAACACAACCTTAATCTTCTTGGACATGCATGGAGATTGTGGACTGAAGAGAGGGCACTGGAACTATTGGATGAAGTGTTAAGTGAAATATTCATATCTTTTGAAGTCGTACGCTGCATACAAGTGGGCCTATTATGTGTACAACAAAAGCCAGAAGATAGGCCAGACATGTCATCAGTGGTTCTAATGCTTAATGGTGAGAAATTGTTGCCCAACCCAAATGTTCCGGGGTTTTACACAGTAGGAGATGTTACCCTTGAATCCAATATTAAACCTGTGAATCTCTTCTCAAGTACATATATATATGACCTTTTCTTTTCTTTTTATGATTCCTCCAATGGTGGTTGTCCTATTATGAGTAGGGTAGTTACTCCTATTAGAGAGGAACCATTGTCATTTAGTTGTATTGTCTCTGTTTCAATGGAAGAACTTTCTTCTCCTCCTTCTGCCACTATTGCTTCGGTGGCTTTTATTGTGCCACTGGATGTGGTGGCTATGGAAGGTTCTTCCAAGGGATTTGATTATAAGCAACTAAATGCCAAGGCTAGAGCTCTAGTGCTAAAGAAAGGTTTGTTGGATGGTTTCCAGAACCCTCAAAAGAAGAAGGTTGACTCCACCTAA 2688 0.378 MVDNLRMLFTWSILLSNLTNSTLLDSLSPSQSIRDGETLVSEEGTFEMGFFCPGSSTKQYLGIWYRNASPSKVVWVANREKSLQNNSGVVKIDEKGVIMILNGNKNTIWWSNNTSRKVAKNPIMQLLDSGNLVVRNERDINEDNFLWQSFDYPCDTLLPGMKLGWNLVTGLERFLSSWKSEDDPSKGEYYLKLDLRGYPQVFGYKGDVIRSRVGSWNGQGLVGYPMRTLAPYANELVFNEKEVYYDYRILDRSIFFSVTLMPSGFGQILLWTNQTRMVKVLSFSDSDLCEEYAMCGTNAICNIDGNYSQTCDCIKGYVPKFPEQWNVSYWYNGCVLMNKSDCKNHNTDGFFRYTGLKLPDTSSSWFSSTMNLEACKKSCLKNCSCKAYANLDIRNGGSGCLLWFDDLIDMRRFSERGQDIYFRVHTSSNLDLSDHVARNGHERNGKRIIGITVGANIVGLIACVCITIILKKKARIIYRKNFTRKLREEGLDLSTFDFPTIAKATKNFAESNKLGEGGFGPVYKGILKDGQEFAVKRLSKKSFQGLEEFRNEVVLIAKLQHRNLVKLIDETRRILVDWPLRFNIICGIARGLLYLHEDSRLRIVHRDLKTSNILLDSSLNPKISDFGLARTLSGDQVEANTNRVAGTYGYMPPEYAARGNFSLKSDVFSYGVIVLEIVSGKRNREFSDPKHNLNLLGHAWRLWTEERALELLDEVLSEIFISFEVVRCIQVGLLCVQQKPEDRPDMSSVVLMLNGEKLLPNPNVPGFYTVGDVTLESNIKPVNLFSSTYIYDLFFSFYDSSNGGCPIMSRVVTPIREEPLSFSCIVSVSMEELSSPPSATIASVAFIVPLDVVAMEGSSKGFDYKQLNAKARALVLKKGLLDGFQNPQKKKVDST* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01515 895 SMART serkin_6 508 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01515 895 CDD B_lectin 30 153 IPR001480 -
Lapu11g01515 895 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Lapu11g01515 895 Gene3D - 20 150 IPR036426 -
Lapu11g01515 895 PIRSF SRK 567 788 IPR024171 GO:0004674
Lapu11g01515 895 PIRSF SRK 1 569 IPR024171 GO:0004674
Lapu11g01515 895 Gene3D Hepatocyte Growth Factor 341 428 - -
Lapu11g01515 895 Gene3D Transferase(Phosphotransferase) domain 1 494 564 - -
Lapu11g01515 895 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Lapu11g01515 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Lapu11g01515 895 Pfam Protein kinase domain 583 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01515 895 Pfam Protein kinase domain 509 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01515 895 ProSiteProfiles Protein kinase domain profile. 508 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01515 895 Pfam D-mannose binding lectin 73 179 IPR001480 -
Lapu11g01515 895 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Lapu11g01515 895 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 150 - -
Lapu11g01515 895 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Lapu11g01515 895 SMART ntp_6 345 424 IPR003609 -
Lapu11g01515 895 SMART blect_4 30 153 IPR001480 -
Lapu11g01515 895 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 559 761 - -
Lapu11g01515 895 ProSiteProfiles EGF-like domain profile. 285 323 IPR000742 -
Lapu11g01515 895 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 743 - -
Lapu11g01515 895 CDD PAN_AP_plant 339 424 - -
Lapu11g01515 895 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 341 424 - -
Lapu11g01515 895 Gene3D Transferase(Phosphotransferase) domain 1 565 760 - -
Lapu11g01515 895 Pfam PAN-like domain 342 410 IPR003609 -
Lapu11g01515 895 SUPERFAMILY Protein kinase-like (PK-like) 494 769 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01515 Lapu-Chr11 19484811 19490211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01515 460 768 Receptor kinase-like Gene Family AT4G23140 50.287 6.58e-104 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01515 Pkinase 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01515 - - gmx:100787059 1228.77