Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01514 ATGACTAGATCTTCAACTTCAGTTGACAGTTTATTAGTTGGTCAATCCATCCAAGATGGTAAGACTTTGGTTTCAGCAGGTGGCATTACTGAACTGGGTTTCTTCAACCCAGGAAACTCAACAAGACGATACTTGGGTGTATGGTATAAAAATGTATCCCCTTTAACAGTGGTCTGGGTGGCCAACCGAAATGCACCTCTTGAGAATAAATCAGGAGTTTTAAAACTCAACGAAAAAGGGATTCTTGTGCTTCTCAATGGTACAAACAACACCATTTGGTCATCATCCAACAAATCAATCAAACCAGGGAATAATCTAGTCGCTTATCTCTTGGATTCGGGAAATTTTGTAGTGAAAAATGGACATGAAACTAATGAGGACAACGTCTTGTGGCAGAGTTTTGATTTTATTGGTAATACGTGGATCGCGGGAATGAAGCTTGGGTGGAACTTAGAGACTGGTCTAGAAAGATATGTATCATCTTGGAAAAGTGATGATGATCCTGCAGATGGAGAATATGCTGTAAAATTGGATCTTAGAGGATATCCACAGATAATGATATTCAAGGGACCCAGTATAAAATACAGACAAGGGTCATGGAATGGGTTATCTACAGTTGGATATCCAGCACCAATTCTTGAAACGCTACAAAAATTTGTGATTAATGAAAAGGAGGTGTATTACGAGTTTGAGCTTCTTGATAAAACTATCTTCAAGTTATTTACAATGACCCCTTTTGGCACTCTGCACCATTTGTATTGGACAAGTCAAACCAACATCCCGGAAATCATCTCAACTGGGGAGCAAGATCAATGTGAGAATTATGCTTCTTGTGGAGCAAATTCTATATGCAATTACGTTGATAACCATCCAACTTGTGAATGCCTTAGAGCTTATGTTCCCAAGTCCCCTGATCAATGGAATAGAGCAATATGGTTTGATGGTTGTGTTCCAAGAAATAATGTTAATTGTACAATCAGTTATACAGATGACTTCCGGAAGTACGAACACATGAAATTGCCAGATACGTCTTCGTCATGGTTTAATAAAACCATGAACCAAGATGAATGTGAGAAGTTATGTCTTAAAAATTGTTCTTGTACAGCATATGCTAATTTAGATATTCGAGATGGTGGAAGTGGCTGTTTACAATGGTTTAATGCTTTAGTTGACTTGAGGAAATTCTCTCGGTGGGGACAGGACTTGTATATCAGAGTCCCTGCTTCAGAATCAGATCGTTCTGGCAATGGAAACATCAAGAAAAAGATAATAGGTATCACTGTTGGTGTGACAATTTTTGGATTAATCATCGCCTGTGCTAGCAAACTTATAATTAAAAATCCAGATGAAACCAAAAGGAAGCTGCTTAACTGGTGTAACCGTTTCAACATCATTATTGGAATTGCTCGAGGACTTTTGTATCTTCATCAAGATTCTAGGTTGAGAATTGTACATAGAGATCTAAAACCAAGCAATATTTTACTAGATGCAAATTTGAATCCAAAAATATCAGATTTTGGGTTGGCTAGATCATTTTTGGGAGATCAAGTTGAAGCAAACACAAATAGAGTGGCTGGGACATATGGTTACATGCCTCCTGAGTATGCCGCACGTGGACACTTTTCTGTGAAATCAGATGTATTTAGTTATGGTGTGATAGTACTAGAGATCGTAACTGGGAAGAAAAACTGGGAATATTCAGATCCAGAGCAATGCAATAATCTTCTAGGATATGCATGGAGATTATGGACTGAAGAGAGGATGTTGGAACTACTAGATGATGCGTTGGGAGAACAATTTGCAGCTTCTGAAGTCATACGATGCATACAGGTAGGTCTATTGTGTGTGCAACAAAGACCACAAGATAGACCAGACATGTCATCGGTGGTTTTAATGTTGAATGGTGATAAATTGTTGCCAAAGCCACGAATTCCAGGCTTTTACACTGAAATAGATAATACATCTAAAGAAAATTCTTTGGAAAATCACAAACTTTGCTCAGTAAATGAACTATCCATCACAATGTTAGAAGCAAGATAG 2040 0.3799 MTRSSTSVDSLLVGQSIQDGKTLVSAGGITELGFFNPGNSTRRYLGVWYKNVSPLTVVWVANRNAPLENKSGVLKLNEKGILVLLNGTNNTIWSSSNKSIKPGNNLVAYLLDSGNFVVKNGHETNEDNVLWQSFDFIGNTWIAGMKLGWNLETGLERYVSSWKSDDDPADGEYAVKLDLRGYPQIMIFKGPSIKYRQGSWNGLSTVGYPAPILETLQKFVINEKEVYYEFELLDKTIFKLFTMTPFGTLHHLYWTSQTNIPEIISTGEQDQCENYASCGANSICNYVDNHPTCECLRAYVPKSPDQWNRAIWFDGCVPRNNVNCTISYTDDFRKYEHMKLPDTSSSWFNKTMNQDECEKLCLKNCSCTAYANLDIRDGGSGCLQWFNALVDLRKFSRWGQDLYIRVPASESDRSGNGNIKKKIIGITVGVTIFGLIIACASKLIIKNPDETKRKLLNWCNRFNIIIGIARGLLYLHQDSRLRIVHRDLKPSNILLDANLNPKISDFGLARSFLGDQVEANTNRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIVTGKKNWEYSDPEQCNNLLGYAWRLWTEERMLELLDDALGEQFAASEVIRCIQVGLLCVQQRPQDRPDMSSVVLMLNGDKLLPKPRIPGFYTEIDNTSKENSLENHKLCSVNELSITMLEAR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01514 679 Pfam PAN-like domain 327 392 IPR003609 -
Lapu11g01514 679 SMART ntp_6 327 406 IPR003609 -
Lapu11g01514 679 ProSiteProfiles PAN/Apple domain profile. 324 407 IPR003609 -
Lapu11g01514 679 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 134 - -
Lapu11g01514 679 Gene3D Hepatocyte Growth Factor 323 402 - -
Lapu11g01514 679 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 323 406 - -
Lapu11g01514 679 Pfam Protein kinase domain 460 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01514 679 Pfam S-locus glycoprotein domain 195 303 IPR000858 GO:0048544
Lapu11g01514 679 SMART blect_4 14 137 IPR001480 -
Lapu11g01514 679 FunFam - 445 642 - -
Lapu11g01514 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Lapu11g01514 679 Pfam D-mannose binding lectin 56 163 IPR001480 -
Lapu11g01514 679 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 168 IPR036426 -
Lapu11g01514 679 CDD PAN_AP_plant 321 407 - -
Lapu11g01514 679 CDD B_lectin 15 136 IPR001480 -
Lapu11g01514 679 ProSiteProfiles Protein kinase domain profile. 238 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01514 679 ProSiteProfiles Bulb-type lectin domain profile. 8 131 IPR001480 -
Lapu11g01514 679 SMART serkin_6 350 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01514 679 Gene3D Transferase(Phosphotransferase) domain 1 444 639 - -
Lapu11g01514 679 SUPERFAMILY Protein kinase-like (PK-like) 451 643 IPR011009 -
Lapu11g01514 679 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 441 - -
Lapu11g01514 679 Gene3D - 3 134 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01514 Lapu-Chr11 19443364 19446554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01514 449 679 Receptor kinase-like Gene Family AT4G11530 52.941 2.35e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01514 Pkinase 2.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01514 - - gmx:100814745 660.603