Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01513 ATGTCATGTTTTTGGTTCTTGATATTCTTTTACATGTGGGGAACATGCACATCATTGGACACTTTGGCAGTGAGTCAAACCATCCGAGATGATAAGAATGAGACTTTGGTTTCAGCAGGTGGAATTATTGAACTGGGTTTCTTGAATCTGGGAAATTCATCAAGGAGATACTTAGCTATGTGGTACAGAAATGTGTCACCTTTAACAGTGGTGTGGGTGGCTAACGGAAATACACCTCTTGATAATAAATCAGGAGTTCTGAAACTCAACGAGAAAGGGATTCTTGTGCTACTCAATGGCACACAAAGCATTATTTGGTCATCCAACATATTAGGCAAAGCAGTGAATGATCCAATTGCTCAGCTCTTGGATTCGGGAAATTTTGTCGTGAAAATTGGACAGAGAACCGGCAAGGAGAGAATCTTGTGGCAGAGGTTTGATGAAATGAGTGATACGATTTTGCCTGGAATGAAGCTTGGATGGAACTTGGAAACGGGTACAGAAAGATATATGTCAACTTGGAAAAGTGCTGATAATCCTGCAGAGGGAGAATATAGTTTGAAACTTGACCGCAGAGGATATCCTCAAGCAATTATATTCAAGGGATCAGAGATAACGTTCAGACTTGGGCCATGGAATGGGCAGGCATGGGCAGGGTATCCTGCTAGAATTCCTCAAAGTTCACAAATATTTGTATTTAATAAAACACAGTTGTATTATGAGTACAACCTTCTTGATAGTTCTGAGATCATCAGCATATTTAAACTAAATCCATCTGGTATTGGTCAGAAAATTTTTTGGACAGCTCATAGCACCTCCGAGAGAGTTCTATTGACTCAGGAGAGAGATCAATGCGAGATTTATGCCTTTTGTGGTTCAAATTCTGTATGCAATTATGATGGTAACCATCCAACTTGTGAATGCCTGAGAGGATTTGTTCCCAAGTCTCCTCTTGAGTGGAATATGACAATTTGGCACAACGGTTGTGTTCCAAGGAATAAATCTAATTGCAAAAACAGTTATACGGATGGCTTCTTACTCTACTCATTCATGAAATTGCCAGACACATCTTCTTCATGGTTTGATACAACTGTGAACCTGGATGAATGTCGGAAGTTATGTCTTAAAAATTGTTCTTGTATTACATATGCAAATATAGATATTCGAGAAGGAAGTGGCTGCCTACATTGGTTCAATGCTCTAGTTGACTTGAGGAATTTCTCTCAGTTGGGGCAAGACATTTACATCAGAGTCCCTGCTTCAGAATTAGATCATGGTGGCGATGGAAACATGAAGAATAAGATAGTAGGAATCACTATTGGTGTGACTACTTTTGGATTAATCATCACATGTGTCTGCATACTGATAATTAAAAAACCAGTGGCAGAAAGTGTATATTGTTATATGGCACAATTTCAATGGCGGAAAGAATACTTTAGATTGAGGAATGAAGACATGGATTTGCCAACATTTGAGTTGTCTATCATTGCTAAAGCCACGAATAATTTTTCCAGCAGCAATAAAATAGGGGAAGGTGGATTTGGACCAGTTTATAAGGGTACACTGCTAGATGGACAAGAGGTAGCCGTAAAACGGAACTCAAAGATGTCTGATCAAGGACAGGAGGAGTTTAAAAATGAAGTTGTTTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAACTTTTAGGTTGCTGCATTCAAGGAGAGGAAAAATTGTTGATCTATGAGTACATGCCTAACAAGAGCTTAGACTACTTCATCTTTGATGAAGCTAGAAGCAAGCTCTTAGCCTGGCATCAACGTTTTCACATTATTTGTGGCATTGCTCGAGGGATTCTCTATCTTCACCGAGACTCTAGCTTAAGAATTATTCACAGAGATTTGAAAACCAGCAATATCCTACTAGATGCCTATATGAATCCTAAAATCTCAGACTTTGGCATGGCTCGGACTTTTGGCACTGATCAAATTGAAGACAAAACAAGAAAAGTTGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTGTTCATGGTCATTACTCTGTGAAATCAGATGTGTTTGGTTTTGGTGTGATAGTACTAGAGATAATTAGTGGAAACAAGAATAGGGGATATTCTGACCCAGAACACTCTCTTAATCTTCTTGGGCATGCATGGAGATTATGGACTGAAGACAGGCCATTGGAACTCATAGATAAACACATGCATGAAAGATGCATTCTTTTTGAAGCCTTAAGATGTATACACGTGGGTTTGCTATGTGTACAACAAAAAGCAGAGGATAGACCAGACATGTCTTTTGTCATTCCTATGCTGAATGGCGAGAAATTATTGCCTCGGCCAAAAGCTCCTGGATTTTATACAGGAACGTCTACTCCTGAATCAGTATCTTCATTGCAAACATGCAAACTTTTATCACGAAATGAGATGTCCCTTACAATTTTTGAGGCAAGATAG 2463 0.3906 MSCFWFLIFFYMWGTCTSLDTLAVSQTIRDDKNETLVSAGGIIELGFLNLGNSSRRYLAMWYRNVSPLTVVWVANGNTPLDNKSGVLKLNEKGILVLLNGTQSIIWSSNILGKAVNDPIAQLLDSGNFVVKIGQRTGKERILWQRFDEMSDTILPGMKLGWNLETGTERYMSTWKSADNPAEGEYSLKLDRRGYPQAIIFKGSEITFRLGPWNGQAWAGYPARIPQSSQIFVFNKTQLYYEYNLLDSSEIISIFKLNPSGIGQKIFWTAHSTSERVLLTQERDQCEIYAFCGSNSVCNYDGNHPTCECLRGFVPKSPLEWNMTIWHNGCVPRNKSNCKNSYTDGFLLYSFMKLPDTSSSWFDTTVNLDECRKLCLKNCSCITYANIDIREGSGCLHWFNALVDLRNFSQLGQDIYIRVPASELDHGGDGNMKNKIVGITIGVTTFGLIITCVCILIIKKPVAESVYCYMAQFQWRKEYFRLRNEDMDLPTFELSIIAKATNNFSSSNKIGEGGFGPVYKGTLLDGQEVAVKRNSKMSDQGQEEFKNEVVLIAKLQHRNLVKLLGCCIQGEEKLLIYEYMPNKSLDYFIFDEARSKLLAWHQRFHIICGIARGILYLHRDSSLRIIHRDLKTSNILLDAYMNPKISDFGMARTFGTDQIEDKTRKVVGTYGYMPPEYAVHGHYSVKSDVFGFGVIVLEIISGNKNRGYSDPEHSLNLLGHAWRLWTEDRPLELIDKHMHERCILFEALRCIHVGLLCVQQKAEDRPDMSFVIPMLNGEKLLPRPKAPGFYTGTSTPESVSSLQTCKLLSRNEMSLTIFEAR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01513 820 Gene3D - 16 146 IPR036426 -
Lapu11g01513 820 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Lapu11g01513 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Lapu11g01513 820 CDD PAN_AP_plant 334 419 - -
Lapu11g01513 820 ProSiteProfiles Bulb-type lectin domain profile. 21 143 IPR001480 -
Lapu11g01513 820 SMART blect_4 25 149 IPR001480 -
Lapu11g01513 820 Pfam PAN-like domain 337 404 IPR003609 -
Lapu11g01513 820 CDD B_lectin 33 147 IPR001480 -
Lapu11g01513 820 CDD STKc_IRAK 509 776 - -
Lapu11g01513 820 SMART serkin_6 503 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01513 820 SMART ntp_6 340 418 IPR003609 -
Lapu11g01513 820 Pfam Domain of unknown function (DUF3403) 780 820 IPR021820 GO:0004674
Lapu11g01513 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Lapu11g01513 820 Pfam Protein tyrosine and serine/threonine kinase 506 770 IPR001245 GO:0004672|GO:0006468
Lapu11g01513 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Lapu11g01513 820 ProSiteProfiles EGF-like domain profile. 281 318 IPR000742 -
Lapu11g01513 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 14 146 - -
Lapu11g01513 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 180 IPR036426 -
Lapu11g01513 820 Gene3D Phosphorylase Kinase; domain 1 466 578 - -
Lapu11g01513 820 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Lapu11g01513 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 4 765 - -
Lapu11g01513 820 ProSiteProfiles Zinc finger SWIM-type profile. 363 405 IPR007527 GO:0008270
Lapu11g01513 820 SUPERFAMILY Protein kinase-like (PK-like) 486 774 IPR011009 -
Lapu11g01513 820 Pfam D-mannose binding lectin 69 175 IPR001480 -
Lapu11g01513 820 Gene3D Transferase(Phosphotransferase) domain 1 579 780 - -
Lapu11g01513 820 ProSiteProfiles Protein kinase domain profile. 503 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01513 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Lapu11g01513 820 Gene3D Hepatocyte Growth Factor 336 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01513 Lapu-Chr11 19427422 19430875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01513 432 792 Receptor kinase-like Gene Family AT4G05200 51.892 1.09e-123 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01513 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01513 - - gmx:100786000 1263.06