Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01512 ATGATACAAATCGTACTAAAATCAATGGAAAGCTTTGAAATGCTTGGTGTGTGCCTTTTGTTCCTCTCCTTCATAACCATGTCCTCCACTTTGGAGATGATTACTCCCACCCAACCCCTGGGAGATCATAATGAAACTCTTGTCTCGACAAATGGAACCTTCGAAGCAGGATTCTTCAGCCCTCAAAATTCCAGTAGCCGTTACCTTGGAATTTGGTACAGGAACATCTCCCCCAGAACAGTTGTTTGGGTAGCCAACAAAGAAATACCACTTCAAGACCACTCTGGAGTCTTTGAAGTAGACAGTGACCATGGGTTTCTTAGTATCAAAGATGGTACAGGAACCAAAATATGGTTTTCAAATGGATCACACACACCACCAAGCAAACCAGTTACTGTGGAGTTGTTGGAATCAGGAAACATGGTTGTGAAAGATGGCCATAACTACTTTTTGTGGCAAAGCTTTGATTACCCTGGTGATACTTTACTTCCAGGAATGAAACTTGGAATGAACCTCAAAACGGGCATTCGTCGAGCTCTAAGATCTTGGAAGTCCTATGAAGATCCTACCCCAGGTGATTTTTTATTTGGTGTTGATACTCGTGGCCTTCCACAACTAGTTATCAGAAAGGAGGCCAGTGATTCCTTAGTTTATAGACCAGGTTCATGGAATGGTCTTAGTGTCACAGGACTACCTGGAGAAATATCTGACCCATTAGTTGAATCCCTTTTTGTTATGAATGAAGATGAAATCTTCTACGAGATTCAACTCTTGAATAATTCAACTAAACTGAGAAGCAGATTGATCCCAGAAGGGTATCAAGTACGTCTAATATGGTCAGATGAGAGTAAAAAATGGGATCAGCAACTCCCTGGTTCACATGATGAGTGTGAGAGCTATGCCATGTGTGGGGCAAATACTATTTGCAATGAGAGTGGAGCACATCAACACTGTGAATGCTTGAGTGGATTCCAATCCAACTTCGCAGATTCATCCTGTGATCGAATTACTCCTCTAGATTGTAACAAGGGAGATAAATTTCAGAAGTACGAGGGAATGAAATTGCCAGACACATCTTCATCTTGGTATGATAAGAAAATGGGTCTTCAGGAATGCGAGAAATTGTGCTTGAGCAACTGCTCTTGTGCTGCATATGCTCAATTGAATATCAGTGCCAACGGAAGTGGCTGCTTGCATTGGTTTGATAATATTATGGACATCAGAGTACTAGCACAGGGTGGACAAGATTTTTATCTGCGAATTACACCCTCAGAATTTCAAGATCACGGCTTCAACAGGAAAATAGCAGGAATTGTAGTTGGATGTACTATATTCATCATTAGCATTGTAGCATTTGGATTCATATTTTGCCTTAAGAGGAAGAATCTCAAGCAATCAGTAGCAGAAACATATTACTGGAAGGGCAAGAGTAACAAGGATGACATTGATTTACCAATATTCGACTTTTTATCCATCTCCCATGCCACAAATAACTTTTCTGAGAGTAACAAATTGGGACAAGGGGGATTTGGACCAGTGTACAAGGGCATATTATCAGATGGGCAAGAAATTGCAGTTAAGAGGCTTTCCAAAACTTCGGGACAAGGTTTGGACGAGTTCAAAAATGAAGTAATGTTGATTGCAAAACTTCAACATCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAACAAGATGAAAAGATGTTAATTTATGAATTCATGCCAAACAGAAGCTTGGATTACTTTATTTTTGATTCAATAAGAAGTACACTAATAGGTTGGGCTAAGAGATTTGAAATTATTGATGGAATTGCTCGAGGACTTCTCTATCTTCATCAAGATTCTAGATTAAAGATTATTCACAGGTATCTCAAGACTAGTAATGTCCTTCTTGATGGTAATATGAAACCAAAAATATCAGATTTTGGTATGGCTAGGACATTTAGCCTAGATCAAGATGAAGCAAACACAAATAAAGTCATGGGAACATATCTCGTGTTGACTCATGTTTTTTTAGTGGTTAATCAAATCAGATGTATTCAGCTTTGGTGTGATTGTATTGGAGATAATAAGTGGGAGGAAGAATAG 2091 0.3912 MIQIVLKSMESFEMLGVCLLFLSFITMSSTLEMITPTQPLGDHNETLVSTNGTFEAGFFSPQNSSSRYLGIWYRNISPRTVVWVANKEIPLQDHSGVFEVDSDHGFLSIKDGTGTKIWFSNGSHTPPSKPVTVELLESGNMVVKDGHNYFLWQSFDYPGDTLLPGMKLGMNLKTGIRRALRSWKSYEDPTPGDFLFGVDTRGLPQLVIRKEASDSLVYRPGSWNGLSVTGLPGEISDPLVESLFVMNEDEIFYEIQLLNNSTKLRSRLIPEGYQVRLIWSDESKKWDQQLPGSHDECESYAMCGANTICNESGAHQHCECLSGFQSNFADSSCDRITPLDCNKGDKFQKYEGMKLPDTSSSWYDKKMGLQECEKLCLSNCSCAAYAQLNISANGSGCLHWFDNIMDIRVLAQGGQDFYLRITPSEFQDHGFNRKIAGIVVGCTIFIISIVAFGFIFCLKRKNLKQSVAETYYWKGKSNKDDIDLPIFDFLSISHATNNFSESNKLGQGGFGPVYKGILSDGQEIAVKRLSKTSGQGLDEFKNEVMLIAKLQHRNLVKLLGCSIQQDEKMLIYEFMPNRSLDYFIFDSIRSTLIGWAKRFEIIDGIARGLLYLHQDSRLKIIHRYLKTSNVLLDGNMKPKISDFGMARTFSLDQDEANTNKVMGTYLVLTHVFLVVNQIRCIQLWCDCIGDNKWEEE* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01512 696 Pfam Protein tyrosine and serine/threonine kinase 502 656 IPR001245 GO:0004672|GO:0006468
Lapu11g01512 696 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 464 574 - -
Lapu11g01512 696 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Lapu11g01512 696 Pfam PAN-like domain 341 407 IPR003609 -
Lapu11g01512 696 SUPERFAMILY Protein kinase-like (PK-like) 483 665 IPR011009 -
Lapu11g01512 696 ProSiteProfiles Protein kinase domain profile. 499 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01512 696 SMART blect_4 37 158 IPR001480 -
Lapu11g01512 696 Gene3D - 27 155 IPR036426 -
Lapu11g01512 696 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 667 - -
Lapu11g01512 696 Gene3D Hepatocyte Growth Factor 338 418 - -
Lapu11g01512 696 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 575 666 - -
Lapu11g01512 696 SMART ntp_6 342 421 IPR003609 -
Lapu11g01512 696 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Lapu11g01512 696 FunFam Receptor-like serine/threonine-protein kinase SD1-8 26 155 - -
Lapu11g01512 696 Gene3D Transferase(Phosphotransferase) domain 1 575 669 - -
Lapu11g01512 696 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 189 IPR036426 -
Lapu11g01512 696 Pfam D-mannose binding lectin 80 184 IPR001480 -
Lapu11g01512 696 CDD PAN_AP_plant 337 421 - -
Lapu11g01512 696 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Lapu11g01512 696 CDD B_lectin 37 158 IPR001480 -
Lapu11g01512 696 Gene3D Phosphorylase Kinase; domain 1 473 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01512 Lapu-Chr11 19205573 19210843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01512 436 677 Receptor kinase-like Gene Family AT4G23190 51.220 4.63e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01512 Pkinase 1.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01512 - - vum:124820888 1100.89