Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01509 ATGACCATTCTTACGATTGTCCTTCTTGTTTGCAAGCTATTTTTGTTCTTCTCTAATCTTTCAGCCGCAACAGACACCATTACACAGTTTGAATCACTTGAAGCTAACAAGACCCTGGTTTCAAACGATGGAACCTTTGAGTTGGGTTTCTTCACCCCAGCCACCACTTCCTCAAACCGCTATCTAGGAATCTGGTACGCAAAAATACCTGTCAGAACCGTGGTTTGGGTTGCAAATCGTGACACTCCAATCATAGACAGCTCCACCAAGTTGAGCATAAATACACAGGGCAACCTCGTACTTGTCGGCCAGAACAACACTGTTATTTGGTCAACCAACGCAACGACCAAAGGGGCTGTTGTGGTGGCACAAATTTTGGACTCAGGCAACTTGGTTGGAATACTACCTGATGGACAAGAGTTTGCTGTTAAGAGACTTTCACAAACATCTGGACAAGGATTAACAGAATTTAAAAATGAGGTTATGCTATGCGCCAAACTCCAACATCGAAATCTAGTTAAAGTTCTTGGATGTTGCATTCAGGAAGATGAGAAATTGCTTATATACGAGTATATGGCCAACAAAAGTTTAGACATTTTTCTTTTTGATCCTAATCGAAGTAAGCTTCTTGATTGGCCTAAGCGTTTTTGTATTATAAATGGAATTGCTCGAGGACTACTTTATCTTCATCAAGACTCAAGACTAAGAATCGTACATAGGGATCTTAAGGCAAGTAATGTTTTATTAAATAGGAAAATGAATCCAAAAATTTCAGATTTTGGCTTGGCTCGAATATGTGGAGGTGATCAAGTTGAAGGAAAAACAAGAAGAGTAGTAGGTACATATGGTTATATGGCACCTGAATATGCCATTGATGGAATATTTTCCATAAAATCTGATGTGTTCAGCTTTGGTGTGTTATTACTGGAGATAGTAAGTGGCAAGAGGAATAGTAGACTTTTCGATCCAAATGACTACAACAATCTTATTGGGCATGCATGGAGGTTATGGAAAGAGGGAAATCCAACACAATTTATTGATGCTAATATAGAGGACTCGTTAATTCTGTATGAGGCCTTGTGTTGCATTCATATTGGCCTTTTATGTGTACAACATCATCCTAATGAAAGACCAAACATGGCATCAATTGTTCTAATGCTGAGCAATGAGAATGCATTACCTCTACCAAATGAACCTAGCTACTTAATCAAAGACATCTCCACGGAAAGAGAATCATCTTCTGATAATTTTACATTATTTTCTGTTAATGATGTCACTATCTCAGTATTGAGTGATAGATAG 1302 0.3833 MTILTIVLLVCKLFLFFSNLSAATDTITQFESLEANKTLVSNDGTFELGFFTPATTSSNRYLGIWYAKIPVRTVVWVANRDTPIIDSSTKLSINTQGNLVLVGQNNTVIWSTNATTKGAVVVAQILDSGNLVGILPDGQEFAVKRLSQTSGQGLTEFKNEVMLCAKLQHRNLVKVLGCCIQEDEKLLIYEYMANKSLDIFLFDPNRSKLLDWPKRFCIINGIARGLLYLHQDSRLRIVHRDLKASNVLLNRKMNPKISDFGLARICGGDQVEGKTRRVVGTYGYMAPEYAIDGIFSIKSDVFSFGVLLLEIVSGKRNSRLFDPNDYNNLIGHAWRLWKEGNPTQFIDANIEDSLILYEALCCIHIGLLCVQHHPNERPNMASIVLMLSNENALPLPNEPSYLIKDISTERESSSDNFTLFSVNDVTISVLSDR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01509 433 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 141 - -
Lapu11g01509 433 Gene3D Phosphorylase Kinase; domain 1 135 192 - -
Lapu11g01509 433 Pfam Protein tyrosine and serine/threonine kinase 139 384 IPR001245 GO:0004672|GO:0006468
Lapu11g01509 433 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 192 394 - -
Lapu11g01509 433 Gene3D - 25 134 IPR036426 -
Lapu11g01509 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lapu11g01509 433 SUPERFAMILY Protein kinase-like (PK-like) 135 408 IPR011009 -
Lapu11g01509 433 SMART blect_4 30 141 IPR001480 -
Lapu11g01509 433 CDD B_lectin 31 132 IPR001480 -
Lapu11g01509 433 Gene3D Transferase(Phosphotransferase) domain 1 193 394 - -
Lapu11g01509 433 SMART serkin_6 126 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01509 433 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 132 IPR036426 -
Lapu11g01509 433 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 133 433 - -
Lapu11g01509 433 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Lapu11g01509 433 ProSiteProfiles Protein kinase domain profile. 94 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01509 433 FunFam Uncharacterized protein 125 191 - -
Lapu11g01509 433 Pfam D-mannose binding lectin 73 132 IPR001480 -
Lapu11g01509 433 Pfam Domain of unknown function (DUF3403) 388 431 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01509 Lapu-Chr11 19140727 19144783 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01509 133 433 Receptor kinase-like Gene Family AT4G11530 53.571 2.32e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01509 PK_Tyr_Ser-Thr 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01509 - - gmx:100786696 541.191