Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01507 ATGGAAAATGAAAGTCAACAAGAAGACTTTGAATTACCTTTGTTTGATCTTGCCTCAATAACATATGCAACAAATCACTTCTCTAATCACAATAAGCTTGGTGAAGGTGGTTTTGGACCAGTATATAGGGGAACATTACCAGATGGACAAGAAATTGCTGTGAAGAGGCTTTCACAAACATCTAAACAAGGATTAAAAGAATTTAAGAATGAGGTTATGTTATGTGCCAAACTTCAACATCGAAATCTTGTTAAAGTTTTTGGATGTTGCATTCAAGATAACGAGAAACTGCTTCTATACGAATATATGGCCAACAAAAGCTTAGATTTCTTTCTTTTCGATGCTAGTAGAAGAAAACTACTTGATTGGCCTAAGCGTCTTTGCATCATAAATGGAATTGCTCGAGGAGTACTTTATCTTCATCAAGACTCCAGATTAAGGATCATACATAGAGATCTTAAGGCAAGTAATGTATTATTAGATAAAAAAATGAACCCAAAAATTTCAGATTTTGGTTTAGCTCGAATGTGTGGAGGTGATCAAATTGAAGGACAAACAAACAAAGTAGTTGGTACATACGGTTATATGGCTCCTGAATATGCCTTTGATGGAATATTTTCCATCAAATCTGATGTGTTTAGCTTCGGTGTATTGTTGCTTGAGATAGTAAGCGGCAAGAAAAATAGACTCTTCCATCCAAGCGGCTACAATAATCTTATTGAGCATGGATGGGGATTATGGAAAGAGGGAAATGCAAAGCAATTTATTGACTCTAGTTTGGAGGATCCAAACATTCTATACGAAGCCTTGCGTTGCATTCATATTGGTCTTTTATGTGTACAACATCATCCTAGTGATAGACCAACCATGGATTCCGTGGTTACATTATTGAACAATGAGAATGTATTGCCTCTACCGAAGGAGCCTAGCTACTTAATTAAAAACATCTTAACCAGAAGAGAATCTTCTTATGGAAATCTTACGTCTTTTTCTAATAATAATGTAACTATCTCAATGTTGAGTGATAGATAG 1032 0.3527 MENESQQEDFELPLFDLASITYATNHFSNHNKLGEGGFGPVYRGTLPDGQEIAVKRLSQTSKQGLKEFKNEVMLCAKLQHRNLVKVFGCCIQDNEKLLLYEYMANKSLDFFLFDASRRKLLDWPKRLCIINGIARGVLYLHQDSRLRIIHRDLKASNVLLDKKMNPKISDFGLARMCGGDQIEGQTNKVVGTYGYMAPEYAFDGIFSIKSDVFSFGVLLLEIVSGKKNRLFHPSGYNNLIEHGWGLWKEGNAKQFIDSSLEDPNILYEALRCIHIGLLCVQHHPSDRPTMDSVVTLLNNENVLPLPKEPSYLIKNILTRRESSYGNLTSFSNNNVTISMLSDR* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01507 343 SUPERFAMILY Protein kinase-like (PK-like) 11 297 IPR011009 -
Lapu11g01507 343 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01507 343 CDD STKc_IRAK 33 299 - -
Lapu11g01507 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lapu11g01507 343 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 312 - -
Lapu11g01507 343 Pfam Protein tyrosine and serine/threonine kinase 29 296 IPR001245 GO:0004672|GO:0006468
Lapu11g01507 343 Gene3D Transferase(Phosphotransferase) domain 1 103 303 - -
Lapu11g01507 343 ProSiteProfiles Protein kinase domain profile. 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01507 343 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 102 - -
Lapu11g01507 343 PIRSF ILK 17 302 - -
Lapu11g01507 343 Gene3D Phosphorylase Kinase; domain 1 1 102 - -
Lapu11g01507 343 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 103 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01507 Lapu-Chr11 19093496 19097094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01507 1 315 Receptor kinase-like Gene Family AT4G23230 54.259 2.62e-121 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01507 PK_Tyr_Ser-Thr 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01507 - - gmx:100786696 584.719