Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01506 ATGCCACTTCTTACAGCTATGTTTCTTTTCCAAAACCTACTAGTGCTTTTCTCTCAAATTTCCCATGCAACTGACACCATTACTAAGTCTCAGCCACTTCATGATGGAAGCACCTTGGTCTCCAAAGATGGAACCTTCGAGTTGGGTTTCTTCACTCCCGGTAGTTCCACAAACAGCTACGTTGGAATCTGGTTCAAAAACATTCCAGTTAGAACCATAGTTTGGGTTGCCAACCGTGACAACCCTTCAAAACATAAATCCAACATGTTGTCTCTAAACAAAGAGGGAAACCTCGTACTTCTCAGCCAAGACCGGTCTCTTGTTTGGTCGACAAACGCAACAACAATGGTTTTGAATCCCATTGTGCAACTTTTAGAGAATGGAAATTTAGTGATTAGAGACGAAAACGATAACAACAATAATGAAGATAGTTTTGTGTGGCAGAGCTTTGACCATCCTTGTGATACACTCTTGCAAGGAATGAAGTTGGGGTGGAACCTTAAAACTGGTCTCAATAGGCATCTTAGAGCTTGGAAAAATTGGGATGACCCATCTTCGGGAGATTTGACTTCCGGTGTTAAGCTTGGGGTCAATCCTGAATTGGCAATATGGAAAGAGTCGGTTGAGTACTATAGGAGTGGTCCTTGGAATGGGATTTTTTCTAGTGGGGTATTTGGATTCAGTCCTAATCCACTTTTTGACTATAAATATGTTCAGAATGAAGATGAAGTGTATGTTAGATACACTCTCAAGAATAGTTCTGTGATTTCTATAATTGTTTTGAACCAAACCCTTTATCTTCGCCAACGCATTACATGGATTCCACACACTAGAACTTGGAGTGTGTACCAATCCCTGCCACAAGACAGTTGCGATGTTTACAATGTTTGTGGTGCATATGGGAGTTGCGTGATTAATGCGTCCCCAGTGTGCGTATGCTTGGAGGGGTTCAAGCCAAAATCACCCCTAGATTGGAATCAAATGGATTGGACACAAGGGTGTGTGCATAGTGAACCATGGAGTTGTGGGGTCAAAAATAGAGACGGGTTTCGTAGAATTACCGGGATGAAAATGCCAGATACCACACATTCTTGGATAAATCAAAGTATGACCCTAGAAGATTGTAAGGCCAAATGCTTGGAAAATTGTTCTTGCACTGCTTATGCGAACTTGGACACAAGTGGGGGAGGTAGTGGTTGCTCCATCTGGTTTGGTGATCTTGTTGATATGAGAGTTTCAGAAAGTGGGCAAGATCTATATGTTCGAATGGCCACTTCTGATACGGATGCTAAACATAAGCATTCAAAAAAGTTAGTCTCGGTGGTCTCGATCACAGTTTCTTTAGTCCTTCTTGTTCTATTGGCATTCTCCTACATTTACATGACCCGAAAAAAGTATAAAGAAAATGGAATATGGACAGAGGAGAAAGATGATGGTGGGCAAGAAAATTTGGAGCTTCCTTTCTTTGATCTTGCAACAATAATTAATGCCACCAATAACTTCTCAATTTACAACAAGCTTGGCGAAGGTGGTTTTGGACCTGTATATAAGGGTACAATGCTAGATGGACAAGAGATTGCAGTTAAAAGGCTTTCAAGGAGTTCCGGTCAAGGATTGAAAGAATTTAAAAATGAAGTCATATTGTGTGCTAAACTTCAACATCGAAATCTTGTGAAGGTTATTGGTTGTTGCATAGAAGGAGAAGAAAAAATGTTACTATATGAATACATGCCAAATAGAAGTCTAGATTCATTTATTTTTGATCCAATACGAGGTAAACTTTTAGATTGGCCTATGCGCTTTAACATCTTGTATGCAATTGCCAGAGGACTCCTCTACCTTCATCAAGATTCTAGACTAAGAATTATACACAGAGATTTGAAAGCAAGCAACATTTTACTAGACAATAATATGGATCCGAAAATTTCAGATTTTGGTTTGGCTAAAATGTGTGGAGGTGATCAAGTTGAAGGAAATACAAATAGAATTGTTGGAACATATGGTTATATGGCACCTGAATATGCTATTGATGGATTATTCTCTACAAAATCAGATGTTTTTAGCTTTGGAGTATTGTTGTTAGAAATGATCTCTGGAAAGAAAAATAGAACAGTGACATGTGAAGACAATAGTGATAATCTCATTGGACATGCATGGAGATTGTGGAAAAATGGAATTCCAGAACAATTACTTGATGCTAATGTAGTGGACTCAAGTAATATATCAGAAGTTGTTCGCTGCATTCAAATTGGTCTTTTATGTTTGCAACATCATCCTGAAGATAGGCCAAACATGACATCGGTGATTGTAATGTTGAGCAGTGAAAATGTTTTATCTTTACCAAAGGTACCAGGCTTCTTGATTAGAAATATTTCTATCCAAGAAGAGAAATCTTTTGGTAAGCAAGAGTCTTGTTCAATCAATGAAGTAACTGTCTCGTTATTAGATGCTAGATAG 2457 0.3867 MPLLTAMFLFQNLLVLFSQISHATDTITKSQPLHDGSTLVSKDGTFELGFFTPGSSTNSYVGIWFKNIPVRTIVWVANRDNPSKHKSNMLSLNKEGNLVLLSQDRSLVWSTNATTMVLNPIVQLLENGNLVIRDENDNNNNEDSFVWQSFDHPCDTLLQGMKLGWNLKTGLNRHLRAWKNWDDPSSGDLTSGVKLGVNPELAIWKESVEYYRSGPWNGIFSSGVFGFSPNPLFDYKYVQNEDEVYVRYTLKNSSVISIIVLNQTLYLRQRITWIPHTRTWSVYQSLPQDSCDVYNVCGAYGSCVINASPVCVCLEGFKPKSPLDWNQMDWTQGCVHSEPWSCGVKNRDGFRRITGMKMPDTTHSWINQSMTLEDCKAKCLENCSCTAYANLDTSGGGSGCSIWFGDLVDMRVSESGQDLYVRMATSDTDAKHKHSKKLVSVVSITVSLVLLVLLAFSYIYMTRKKYKENGIWTEEKDDGGQENLELPFFDLATIINATNNFSIYNKLGEGGFGPVYKGTMLDGQEIAVKRLSRSSGQGLKEFKNEVILCAKLQHRNLVKVIGCCIEGEEKMLLYEYMPNRSLDSFIFDPIRGKLLDWPMRFNILYAIARGLLYLHQDSRLRIIHRDLKASNILLDNNMDPKISDFGLAKMCGGDQVEGNTNRIVGTYGYMAPEYAIDGLFSTKSDVFSFGVLLLEMISGKKNRTVTCEDNSDNLIGHAWRLWKNGIPEQLLDANVVDSSNISEVVRCIQIGLLCLQHHPEDRPNMTSVIVMLSSENVLSLPKVPGFLIRNISIQEEKSFGKQESCSINEVTVSLLDAR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01506 818 Gene3D Phosphorylase Kinase; domain 1 465 576 - -
Lapu11g01506 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 150 - -
Lapu11g01506 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 763 - -
Lapu11g01506 818 Pfam Domain of unknown function (DUF3403) 774 818 IPR021820 GO:0004674
Lapu11g01506 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Lapu11g01506 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 576 - -
Lapu11g01506 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Lapu11g01506 818 Pfam Protein tyrosine and serine/threonine kinase 503 770 IPR001245 GO:0004672|GO:0006468
Lapu11g01506 818 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Lapu11g01506 818 CDD PAN_AP_plant 341 424 - -
Lapu11g01506 818 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01506 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Lapu11g01506 818 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Lapu11g01506 818 CDD STKc_IRAK 507 772 - -
Lapu11g01506 818 Gene3D - 18 150 IPR036426 -
Lapu11g01506 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 341 423 - -
Lapu11g01506 818 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Lapu11g01506 818 CDD B_lectin 30 153 IPR001480 -
Lapu11g01506 818 SUPERFAMILY Protein kinase-like (PK-like) 485 782 IPR011009 -
Lapu11g01506 818 SMART blect_4 30 153 IPR001480 -
Lapu11g01506 818 Pfam D-mannose binding lectin 72 179 IPR001480 -
Lapu11g01506 818 SMART serkin_6 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01506 818 ProSiteProfiles PAN/Apple domain profile. 342 424 IPR003609 -
Lapu11g01506 818 Gene3D Transferase(Phosphotransferase) domain 1 577 779 - -
Lapu11g01506 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Lapu11g01506 818 Gene3D Hepatocyte Growth Factor 341 424 - -
Lapu11g01506 818 Pfam PAN-like domain 342 410 IPR003609 -
Lapu11g01506 818 SMART ntp_6 345 423 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01506 Lapu-Chr11 19078963 19082311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01506 434 790 Receptor kinase-like Gene Family AT4G23230 54.469 1.70e-126 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01506 PK_Tyr_Ser-Thr 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01506 - - gmx:100790436 1422.14