Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01505 ATGGCCGTTCCACTACCTTTCACGCTTGTCATCATAGCCACCCTATTTTTCCTCACATCAAGAACTTCCTCTGAAACCAACATCATCACACAGTTTCAGGCACTTACATATGGAACCAACTTGGTTTCTGAGGAAGGAACCTTCGAGTTAGGTTTCTTCAGCCTAGGTAGTTCCACAAACCTCTACCTAGGAATCTGGTACAAAAAAATCCCAGTAAAAACCATTGTTTGGGTTGCCAACCGCAACAACCCAATCAATAAGACCACCAGCAGCAACAAAAACTCCACCAACTTAACCTTAACCAAAGAAGGAAACCTGGTTCTTCTCAGCAACAACGACACCATTCACTGGTCAACAAATGCAACAACAAAATCTAAATCGGTCAGCGCTGTGGCACAGCTTTTGGAAACAGGCAACTTTGTCCTAAGAGATGAAAAGGACAACAATTCTGGAAACTACTTGTGGCAAAGCTTCGACTATCCTTCCGACACACTTTTACCAGGAATGAAGATAGGGTGGGAAGTAGCAACAGATAGTTCTCAAAGCAACCTTTTAGATTGGTCTATGCGATTAAACATTATAACTGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGACTAAGGATCATACACAGAGATTTAAAATCAAGTAATATCTTGTTAGATGATGATATGAATCCAAAGATTTCTGATTTTGGATTAGCACGAGTGGGTAGAGGTGATCAAATTGAAGGAAATACAAGTAGAGTTGTTGGTACATATGGTTATATGGCTCCTGAATATGCAATTGGAGGAGTATTCTCCATCAAATCTGATGTTTATAGCTTTGGTGTTTTATTATTAGAGGTTTTAAGTGGAAAGAAAAACAAAGGGTTTTCCTACTCAATCCACAACTATAATCTTATTGAACATGCATGGACTTGCTGGAAAGAGTGCATCCCAATTGAATTCATTGATACTTGTTTAAGGGACACATACATTTTATCTGAAGCCTTACGATGCATTCATATCGGTCTTTTATGTGTACAACATCAACCTAATGATAGACCAAGTATGACATCTGTCGTTACAATGTTAACGAGTGAAACTGTTTTACCACAACCAGAAAAACCTATTTTCTTAATGCAAAGGGTTCCTATAGAGGAAGATGTTGGACAAAATGCGTTTTGTCCAACTAATGAAGTAACTATTTCTGAGATGGAACCAAGATAA 1221 0.3841 MAVPLPFTLVIIATLFFLTSRTSSETNIITQFQALTYGTNLVSEEGTFELGFFSLGSSTNLYLGIWYKKIPVKTIVWVANRNNPINKTTSSNKNSTNLTLTKEGNLVLLSNNDTIHWSTNATTKSKSVSAVAQLLETGNFVLRDEKDNNSGNYLWQSFDYPSDTLLPGMKIGWEVATDSSQSNLLDWSMRLNIITGIARGLLYLHQDSRLRIIHRDLKSSNILLDDDMNPKISDFGLARVGRGDQIEGNTSRVVGTYGYMAPEYAIGGVFSIKSDVYSFGVLLLEVLSGKKNKGFSYSIHNYNLIEHAWTCWKECIPIEFIDTCLRDTYILSEALRCIHIGLLCVQHQPNDRPSMTSVVTMLTSETVLPQPEKPIFLMQRVPIEEDVGQNAFCPTNEVTISEMEPR* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01505 406 ProSiteProfiles Bulb-type lectin domain profile. 26 155 IPR001480 -
Lapu11g01505 406 Pfam D-mannose binding lectin 74 181 IPR001480 -
Lapu11g01505 406 Gene3D Transferase(Phosphotransferase) domain 1 175 371 - -
Lapu11g01505 406 ProSiteProfiles Protein kinase domain profile. 47 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01505 406 CDD B_lectin 41 161 IPR001480 -
Lapu11g01505 406 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 173 370 - -
Lapu11g01505 406 Pfam Domain of unknown function (DUF3403) 363 406 IPR021820 GO:0004674
Lapu11g01505 406 SMART blect_4 32 161 IPR001480 -
Lapu11g01505 406 SMART serkin_6 47 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01505 406 Gene3D - 20 158 IPR036426 -
Lapu11g01505 406 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 185 377 - -
Lapu11g01505 406 Pfam Protein tyrosine and serine/threonine kinase 90 362 IPR001245 GO:0004672|GO:0006468
Lapu11g01505 406 SUPERFAMILY Protein kinase-like (PK-like) 180 376 IPR011009 -
Lapu11g01505 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lapu11g01505 406 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 158 - -
Lapu11g01505 406 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 177 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01505 Lapu-Chr11 19039322 19043039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01505 178 406 Receptor kinase-like Gene Family AT3G45860 51.867 3.36e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01505 PK_Tyr_Ser-Thr 7.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01505 - - gmx:100792537 396.356