Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01504 ATGCTAATTCGGATATTACAGAAGATGGAAGGGGTTACAGTGGTTGCATCATCTGGTTCGGTGATCTATTGGATATTAGATTGCTTCCAGATGCTGGGCAAGATCTATACGTTAGATTGGATATCTCCAAAATTGACAAAAGCAAAAACTAACGAGACTGAAGAAGATGAACTAGAATTGCCCTTGTTTGACTTTGATACAATAACATGTGCTACTAATGACTTCTCATATGACAACATGCTTGGTCAAGGTGGTTTTGGTCCTGTATACAAAGGGACATTACGAGATGGACAAAATATTGCAGTGAAAAGACTATCTGATACATCTGCACAAGGACTTAAGGAATTTAAAAATGAGGTTATATTTTGTTCTAAACTTCAACATCGAAACCTTGTCAAAGTTCTAGGCTATTGCATTGAAGAGGAGGAAAAATTACTCATCTATGAATACATGCCTAACAAAAGCCTAAATTTCTTTATTTTTGATAGTTCTCAAAGCAACCTTTTAGATTGGTCTATGCGATTAAACATTATAAGTGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGACTAAGGATCATACATAGAGATTTGAAATCAAGTAATATCCTGTTAGATGATGATATGAATCCAAAGATTTCTGATTTCGGATTAGCACGAGTGGGCAGAGGTGATCAAATTGAAGGGAATACTAGAAGAGTTGTTGGTACATATGGTTATATGGCTCCCGAATATGCCATTGGTGGAGTATTCTCGATTAAGTCTGATGTTTATAGCTTTGGTGTTTTATTATTAGAGGTTTTAAGTGGAAAGAAAAACAAAGGGTTTTCTTACTCAATCCACAACTATAACCTTATTGAACATGCATGGAGATGTTGGAAAGAGTGCATCCCAATTGAATTCATTGATACTTGTTTAAGGAACTCATACATTTTATCTGAAGCCTTACGATGCATTCATATTGGTCTTTTATGTGTACAACATCAACCTAATGATAGACCAAATATGACATCTGTAATCACAATGCTAACGAGTGAAAGTGTTCTACAACAACCAAAACAACCTGTTTTCCTAATGCAAAGGGTTTTGGTTGAGGATGATATTGGACAAAATATGTATTGTCCAACTAACGAAGTAACTATTTCTGAGATGGAACCAAGATAA 1173 0.3512 MLIRILQKMEGVTVVASSGSVIYWILDCFQMLGKIYTLDWISPKLTKAKTNETEEDELELPLFDFDTITCATNDFSYDNMLGQGGFGPVYKGTLRDGQNIAVKRLSDTSAQGLKEFKNEVIFCSKLQHRNLVKVLGYCIEEEEKLLIYEYMPNKSLNFFIFDSSQSNLLDWSMRLNIISGIARGLLYLHQDSRLRIIHRDLKSSNILLDDDMNPKISDFGLARVGRGDQIEGNTRRVVGTYGYMAPEYAIGGVFSIKSDVYSFGVLLLEVLSGKKNKGFSYSIHNYNLIEHAWRCWKECIPIEFIDTCLRNSYILSEALRCIHIGLLCVQHQPNDRPNMTSVITMLTSESVLQQPKQPVFLMQRVLVEDDIGQNMYCPTNEVTISEMEPR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01504 390 Gene3D Transferase(Phosphotransferase) domain 1 151 362 - -
Lapu11g01504 390 Pfam Protein tyrosine and serine/threonine kinase 77 345 IPR001245 GO:0004672|GO:0006468
Lapu11g01504 390 CDD STKc_IRAK 81 347 - -
Lapu11g01504 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Lapu11g01504 390 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 41 150 - -
Lapu11g01504 390 Gene3D Phosphorylase Kinase; domain 1 38 150 - -
Lapu11g01504 390 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01504 390 SMART serkin_6 75 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01504 390 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 361 - -
Lapu11g01504 390 SUPERFAMILY Protein kinase-like (PK-like) 56 346 IPR011009 -
Lapu11g01504 390 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 151 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01504 Lapu-Chr11 19003433 19007882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01504 63 390 Receptor kinase-like Gene Family AT4G11530 56.509 1.41e-131 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01504 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01504 - - gmx:100792537 579.711