Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01503 ATGACCATTTTCACTGCTTCACTTGTTATTTGCAATCTACTTTTTCTCCTCTCAAAAGCTTTATCAACTGATACACTTACCCTCTCACAATCTCTCCCTGATGGCACCACCTTATCGTCCAAAGATGAAACCTTCGAACTGGGTTTCTTTTCCCTAAGAAATTCCACAAACCGTTACCTAGGAATCTGGTTCAAAAATATCCCAGTAAAAACCATTGTTTGGGTTGCAAACCGTGACCACCCTCTCAAAGACAACTCCTCAAAGTTGACCATAGCAAACGACGGAAACCTCGTCCTTCTCACCCAGAACAACACAGTTCACTGGTCAACAAACTCAACAACAAAGCCCTTGAGACCCATTTTGCAACTCTTAAACACCGGAAACTTAATACTTCGCAACGATGACAATGACTATAGTGAAGAGAAGTTCTTGTGGCAAAGCTTTGACTACCCTTCTGACACATTGCTACCAGGAATGAAGCTTGGATGGAACAAAAAAACCGGTCTCAATCGACGTGTTACTGCGTGGAAGAACTGGGATGACCCTTCTGCTGGAAACTTCACATGGGGCATCACATTTGACAGCAACCCTGAAATGGTTCTTTGGAAGGGAACATCTAAGTACCATAGGAGTGGCCCTTGGAACGGTGTCCGGTTCAGTGGTGCATTTGGTGGTTCAAATAGGTTAACAACTCACCCTCTTTTCGTTTACAAATTGGTCAACAACAACAACGATGAAGTGTACTACTCATACAGCTCCACCAACAAGTCCCTGATCTCAATAGTTGTCATGAACCAAACCCTTTTCCGCCGCCAACGCATCCTTTGGATCCCCGAAAACGGAACATGGAGGTTGTTCCAAACCGCACCAAGAGATATTTGTGACACTTACAATCCATGTGGTTCTTATGCAAATTGCGTGGTTGATGCATCACCTGTGTGCCAGTGTTTAGAAGGGTTTGAACCGAAGTCTTCAGAGACTACGGACTCGTCACAGGGGTGTGTGAGAAGTGAACCGTGGAGGTGCAGGGTAAAGAGGAGAGATGGATTTAGAAAATTTGTTGGGTTGAAGTTTCCTGATACGACACATTCATGGGTTAATGGAAGCATGACACTCGACGAATGCAAGGTCAAGTGTTGGAAAAATTGTTCGTGCACGGCTTATGCAAACTTGGATATAAGAGGAGCAGGAAGTGGATGTTCTATTTGGTTCGGTGATCTTATTGATTTGAAAGTTGTTTCAGAAAGTGGGCAATATCTGTATATTCGAATGGCAGATTCACAGACAGATTCTAAAGATGCCCATAAGAAGAAGGCATTGATGCTGATAGGTACCACCGTGGCTCCTACTGTTCTTGTGATTCTATTGGCAATCTTGTACTATTACAAGAGAAAAAGAAAGTATGAAGAAGAAAACGTGTCTGTAGTAAAGAAAGATGAAGTTGGTGGACAAGAAGATAGTATGGAACTACCATTGTTTGATCTTGCAACAATAATTAATGCTACCAACAACTTCTCATCTGACAACAAACTTGGGCAAGGTGGTTTTGGGCCTGTCTACAAGGGTGTATTAGTAGACGGACAAGAAATAGCTGTTAAAAGGCTATCGAGGAGTTCAGGACAAGGAATAACAGAATTTAAGAACGAAGTTATATTATGTTCCAAACTACAACACCGAAATCTAGTTAAAGTTCTTGGTTGTTGCATTGAAGGAGAGGAGAAAATGCTTCTCTATGAATATATGCCTAACAGAAGTTTAGATTCATTTCTTTTTGACTCTACAAAAAGCAAGATTTTGGATTGGTCTAAGCGCTTTCGAATCTTATGTGCAACAGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATAATACACAGAGATTTAAAAGCAAGTAATATTTTATTGGACAACAACTTAAATCCTAAGATTTCAGATTTTGGATTAGCAAGAATGTGTGGAGGTGATCAAATTGAAGGAAATACAAACAGAGTAGTAGGAACATATGGATACATGGCACCTGAATACGTTATTCATGGATTATTCTCCATAAAATCTGATGTATTTAGTTTTGGCATATTGTTGCTGGAAATCATTAGTGGAAAGAAGAACAGAGAGGTTACCTACCCACACCACAGTCATAATCTTATTGGGCATGCATGGAAGTTGTGGAAAGAAGGCACACCAGAAGAATTGATTGATAATTGTTTGGAGGATTCGTGTATATTATCAGAAGCCGTACGTTCCATTCACATCGGACTTCTCTGCCTACAACGTCAACCTAATGATCGACCAAACATGTCCTCTGTGGTTGTTATGTTAAGTAGTGATAATGAATTACCACAACCAAAGGAACCTGGTTTCCTCATAGATAGGATCTTGAATGAACAATCACAACTTGGAAGCCAAACTTCTTCAACCAATGAAGTAACCATTTCAATCCTCGATGCTAGATAA 2463 0.4048 MTIFTASLVICNLLFLLSKALSTDTLTLSQSLPDGTTLSSKDETFELGFFSLRNSTNRYLGIWFKNIPVKTIVWVANRDHPLKDNSSKLTIANDGNLVLLTQNNTVHWSTNSTTKPLRPILQLLNTGNLILRNDDNDYSEEKFLWQSFDYPSDTLLPGMKLGWNKKTGLNRRVTAWKNWDDPSAGNFTWGITFDSNPEMVLWKGTSKYHRSGPWNGVRFSGAFGGSNRLTTHPLFVYKLVNNNNDEVYYSYSSTNKSLISIVVMNQTLFRRQRILWIPENGTWRLFQTAPRDICDTYNPCGSYANCVVDASPVCQCLEGFEPKSSETTDSSQGCVRSEPWRCRVKRRDGFRKFVGLKFPDTTHSWVNGSMTLDECKVKCWKNCSCTAYANLDIRGAGSGCSIWFGDLIDLKVVSESGQYLYIRMADSQTDSKDAHKKKALMLIGTTVAPTVLVILLAILYYYKRKRKYEEENVSVVKKDEVGGQEDSMELPLFDLATIINATNNFSSDNKLGQGGFGPVYKGVLVDGQEIAVKRLSRSSGQGITEFKNEVILCSKLQHRNLVKVLGCCIEGEEKMLLYEYMPNRSLDSFLFDSTKSKILDWSKRFRILCATARGLLYLHQDSRLRIIHRDLKASNILLDNNLNPKISDFGLARMCGGDQIEGNTNRVVGTYGYMAPEYVIHGLFSIKSDVFSFGILLLEIISGKKNREVTYPHHSHNLIGHAWKLWKEGTPEELIDNCLEDSCILSEAVRSIHIGLLCLQRQPNDRPNMSSVVVMLSSDNELPQPKEPGFLIDRILNEQSQLGSQTSSTNEVTISILDAR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01503 820 ProSiteProfiles Protein kinase domain profile. 505 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01503 820 CDD B_lectin 29 151 IPR001480 -
Lapu11g01503 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 784 - -
Lapu11g01503 820 SMART ntp_6 345 424 IPR003609 -
Lapu11g01503 820 CDD STKc_IRAK 511 776 - -
Lapu11g01503 820 SMART serkin_6 505 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01503 820 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Lapu11g01503 820 Gene3D Transferase(Phosphotransferase) domain 1 581 787 - -
Lapu11g01503 820 SMART blect_4 29 151 IPR001480 -
Lapu11g01503 820 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Lapu11g01503 820 Gene3D Phosphorylase Kinase; domain 1 462 580 - -
Lapu11g01503 820 Gene3D Hepatocyte Growth Factor 341 422 - -
Lapu11g01503 820 SUPERFAMILY Protein kinase-like (PK-like) 488 799 IPR011009 -
Lapu11g01503 820 Pfam Domain of unknown function (DUF3403) 777 820 IPR021820 GO:0004674
Lapu11g01503 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 341 424 - -
Lapu11g01503 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 469 580 - -
Lapu11g01503 820 Pfam D-mannose binding lectin 71 177 IPR001480 -
Lapu11g01503 820 CDD PAN_AP_plant 348 425 - -
Lapu11g01503 820 ProSiteProfiles EGF-like domain profile. 290 326 IPR000742 -
Lapu11g01503 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Lapu11g01503 820 Pfam PAN-like domain 342 410 IPR003609 -
Lapu11g01503 820 Gene3D - 19 148 IPR036426 -
Lapu11g01503 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Lapu11g01503 820 Pfam Protein tyrosine and serine/threonine kinase 508 775 IPR001245 GO:0004672|GO:0006468
Lapu11g01503 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 766 - -
Lapu11g01503 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Lapu11g01503 820 Pfam S-locus glycoprotein domain 210 324 IPR000858 GO:0048544
Lapu11g01503 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01503 Lapu-Chr11 18987600 18990995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01503 447 792 Receptor kinase-like Gene Family AT4G23230 55.114 2.65e-129 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01503 PK_Tyr_Ser-Thr 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01503 - - pvu:PHAVU_011G152200g 1523.06