Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01500 ATGATGGCCTATTTCACTTTTCTCTTTCTTTTCACTAATCTGCTGAATTTGTTGCCTATAATTTCATCTGCAGCTGACACCATTAATGGGTCGCAGCCCCTTCTTGATGGCACTACCTTGGTGTCTAAAGATGGAACTTTTGAAATGGGTTTCTTTAGCCCAAAAAATAGTACTAATACTACCACAAATCGCTACCTTGGAATATGGTACAGAAGTATCCCAGTTAGAACCGTCGTTTGGGTTGCCAACCGTGAAAACCCAGTTAAGGATAACTCCAGCAAGTTGAGCATAAGCACGAAAGGAAAACTTGTGATCCTCAGCAAGAACAACACTCTTGTTTGGTCAGCAAACTCAACTGAAGAAACAATAGCACAGAGTCTAATTGTTCAACTGCTAGACTCAGGGAACTTGGTCCTAAGAGATGAGAAGGAATCAAACCCACAAAAATACTTGTGGCAAAGCTTTGACTACCCTTGTGATACTTTCCTGCCAGGAATGAAGATCGGATGGAACCTTAAGACGGGTCTTAACCGGCGTTTAACAGCATGGAAGAACTGGGATGACCCTTCTCCAGGCGATTTCATTTGGGGTATGGTTCTAGGTAACACTACTGAATTGGTTATGTGGAAAGGTTCTAGTGAGTATTATAGGAGTGGCCCTTGGAATGGTGTTAGATTCAATGGAAAAACCACTCCCCTTTTTAACTTGGAGTTAAAGTCCACTGATGATGAAGTGTACTACACGTACAACATAGGGAATAAGTCCTTCATTACAAGAGTTGTTTTGAACCAATCTGTTTATTCTCGCCAGCGATATAATTTAAATGCAGAGAACCAAACTTGGAAGCTATATTCATCAGTTCCTAGAGACATCTGTGACACCTACAATCTTTGTGGTCCCTATGGGAACTGTATTGTGAATGAGTCACCACCGTGCCAGTGTTTAACTGGGTTCAAGCCAAAATCAATTCAAAATTACGAGGCATTGGATTGGAGCCAAGGATGTGTTCTTAGTGAAGCTTGGAGTTGTGGAGTAAAAAACAAAGATGGCTTTAAAAGATTCAGTGGGTTGAAAATGCCAGATACTACAAGTTCTTGGGTTGATGGAAATTTGACACTTGAGAATTGCAAGGAAAAATGCTTGCTAAACTGTTCTTGCACTGCATATGCAAATTTAGATGTCAGTGGAGATGGTCATGGCTGTATCATTTGGTATGGAGCTTTGCTTGATTTAAGGGTGGCTTCAGTTCCTGGGCAAGACCTATATATTCGAATGGTTGCTTCAGAAAATGGATGGCATAAGAAAATTGTGGCGGTGGTGATTCCTGTGACTCTCCTTGCTTTTGTAATTGTTTTCATTTTCACCTGTATTTGCTGGCGGAAAAAAAAACTTAGAGAGAAAACCTCAGAAGAAAATAAAGATGAAGGATGTGAAGAAGACTTAGAGCTTTCTTCCTTTGAATTTTCTGCAATAGTTCGTGCCACTAATAACTTCTCAAGTGACAAGAGGCTTGGCCAAGGTGGTTTTGGACCTGTGTATTGGGGTACTCTAGAAGATGGACAAGAGATTGCTGCCAAAAAGCTTTCTAATAGCTCTGCACAAGGAGTGAAAGAATTCAAGAACGAAGTTATATTGTGTGCCAAACTTCAGCACCGAAATCTTGTTAAGGTTCTCGGTTGTTCCATTCAAGGAGAGGAAAAAGTCCTGGTGTATGAATACATGCCTAATAAAAGCTTGGATTCGTTTCTTTTTGATTCTTCCAAAAGAGCACTGCTAGACTGGTCAAAGCGCTTTAACATTATATTTGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATAATTCATAGAGACATGAAAGCAAGCAATATTCTACTAGACAGTGAATTAAATCCAAAAATTTCAGATTTTGGTGTGGCACGTATGTTTAGTGGAAATCAAACAGAAGAGAATACAAAAATGGTGGTTGGAACATATGGATACATGGCACCAGAATACGCAATTGATGGGCTGTTCTCTATCAAATCTGATGTATACAGCTTTGGGGTACTATTACTAGAGATAGTAAGTGGGAAGAAAAACAGAGGAATTTTCTTTCCAGATCACGGACTTAATCTATTAGGACATGCTTGGAGATTGTGGAAAGAAAGCTCTCCAATGGAATTAGTTGATGCTTCTTTGGGCGACAACTTTACTGTCTCTGAAGTACTACGATGCATACATGTTGGTCTTTTATGTGTGCAACTATATCCAGATGATAGGCCAAACATGGCATCAGTGATTTTTATGTTGAGCAGTGAAAATACTTTGCCACAACCTAAGGAACCTGGTTTCCTTATTGAAAAGATGAAGATTGCAGGAGAATGTTCAACTAGCAATGAAATGAAGACTTCCACTAATGAATTAACTGTAACCCTACTAGAGGCTAGGTAG 2448 0.3962 MMAYFTFLFLFTNLLNLLPIISSAADTINGSQPLLDGTTLVSKDGTFEMGFFSPKNSTNTTTNRYLGIWYRSIPVRTVVWVANRENPVKDNSSKLSISTKGKLVILSKNNTLVWSANSTEETIAQSLIVQLLDSGNLVLRDEKESNPQKYLWQSFDYPCDTFLPGMKIGWNLKTGLNRRLTAWKNWDDPSPGDFIWGMVLGNTTELVMWKGSSEYYRSGPWNGVRFNGKTTPLFNLELKSTDDEVYYTYNIGNKSFITRVVLNQSVYSRQRYNLNAENQTWKLYSSVPRDICDTYNLCGPYGNCIVNESPPCQCLTGFKPKSIQNYEALDWSQGCVLSEAWSCGVKNKDGFKRFSGLKMPDTTSSWVDGNLTLENCKEKCLLNCSCTAYANLDVSGDGHGCIIWYGALLDLRVASVPGQDLYIRMVASENGWHKKIVAVVIPVTLLAFVIVFIFTCICWRKKKLREKTSEENKDEGCEEDLELSSFEFSAIVRATNNFSSDKRLGQGGFGPVYWGTLEDGQEIAAKKLSNSSAQGVKEFKNEVILCAKLQHRNLVKVLGCSIQGEEKVLVYEYMPNKSLDSFLFDSSKRALLDWSKRFNIIFGIARGLLYLHQDSRLRIIHRDMKASNILLDSELNPKISDFGVARMFSGNQTEENTKMVVGTYGYMAPEYAIDGLFSIKSDVYSFGVLLLEIVSGKKNRGIFFPDHGLNLLGHAWRLWKESSPMELVDASLGDNFTVSEVLRCIHVGLLCVQLYPDDRPNMASVIFMLSSENTLPQPKEPGFLIEKMKIAGECSTSNEMKTSTNELTVTLLEAR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01500 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Lapu11g01500 815 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 760 - -
Lapu11g01500 815 SMART blect_4 31 158 IPR001480 -
Lapu11g01500 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Lapu11g01500 815 Pfam D-mannose binding lectin 77 184 IPR001480 -
Lapu11g01500 815 Pfam PAN-like domain 343 411 IPR003609 -
Lapu11g01500 815 CDD B_lectin 31 158 IPR001480 -
Lapu11g01500 815 Pfam Protein tyrosine and serine/threonine kinase 501 699 IPR001245 GO:0004672|GO:0006468
Lapu11g01500 815 ProSiteProfiles Bulb-type lectin domain profile. 25 152 IPR001480 -
Lapu11g01500 815 Pfam S-locus glycoprotein domain 216 322 IPR000858 GO:0048544
Lapu11g01500 815 Gene3D Transferase(Phosphotransferase) domain 1 574 780 - -
Lapu11g01500 815 SMART ntp_6 346 425 IPR003609 -
Lapu11g01500 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Lapu11g01500 815 CDD PAN_AP_plant 342 424 - -
Lapu11g01500 815 Pfam Domain of unknown function (DUF3403) 770 815 IPR021820 GO:0004674
Lapu11g01500 815 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01500 815 SUPERFAMILY Protein kinase-like (PK-like) 483 769 IPR011009 -
Lapu11g01500 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 155 - -
Lapu11g01500 815 CDD STKc_IRAK 504 769 - -
Lapu11g01500 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 189 IPR036426 -
Lapu11g01500 815 ProSiteProfiles PAN/Apple domain profile. 343 426 IPR003609 -
Lapu11g01500 815 SMART serkin_6 498 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01500 815 Gene3D Phosphorylase Kinase; domain 1 458 573 - -
Lapu11g01500 815 Gene3D - 19 155 IPR036426 -
Lapu11g01500 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01500 Lapu-Chr11 18949705 18952834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01500 426 815 Receptor kinase-like Gene Family AT4G05200 50.123 5.90e-132 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01500 PK_Tyr_Ser-Thr 6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01500 - - gmx:100790436 1018.07