Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01497 ATGGATATTCTTTCTTCATTGATCTTTGTTGCATGTATACTTATCCCTTCTCTCAAAGTTTTGATAGCAGCTGATACTATTCGTTTGTCCCAGTCCATTAGTGATGGCAGGACCTTGGTTTCCCAAGGTGAAACATTTGAACTTGGTTTCTTCAGTCCTGAGAACTCAAAGAATCGTTACCTTGGAATTTGGTACAAGAATATCACACAGACAGTTGTTTGGGTCGCAAATGGGGCCATCAATGACTCCTCAGGCATCTTAACAGTGAACAGCACAGGAAACCTTGTTCTCACACAGCATGACAAGGTTGTGTGGTACACAACAAGATCTGAAAAACAAGCACGGAATCCAGTGGCACAGCTTTTGGATTCAGGGAACCTTGTGGTAAGAGATGAGAGTGAAACAAACTCGGAATCTTATCTGTGGCAAAGCTTTGACTACCCTTCAGATACATTATTGCCAGGGATGAAGTTGGGACGGAACCTCAGAACTGGTATGGAATGGAGAATGACAGCTTGGAAAAGTCGTAACGATCCATCCCCAGGAATCTTTTATTGGGGTCTATTGCTTTATAATTATCCTGAGTTTTATCTGATGAAGGGAACAGAAAAATTTATGAGAGTTGGACCATGGAATGGCCTACATTTCAGTGGTATACCAGATCAAAAGCCTAACTCCGTTTATGCTTACAACTACATATCCAATGAGGATGAGATGTACTACACCTTCAGCCTCAAGAATGATGCTGTGATCACAAAATTGGTAATGAATCAAACCAGTTATATGTGTTTTCGGTACGTATGGATGGAGGATGGACAATATTGGAAGTTATATAAATCACTGCCAAAAGACAACTGTGACTATTATGGAATATGTGGAGCCTATGGGACTTGCACCATCACAGGCTCTCAAATATGTCAATGCTTATCAGGTTTCAGTCCCAAGTCACCACAAGCATGGAACTCATCTGACTGGTCTGATGGATGTGTACGGAATAAGCCATTAAACTGCACTGACAAACTCAAGGATGAGTTTGTGAAAGTGAAAGGTGTGAAAGTGCCAGATACTACAAATACTTGGGTAGATAAGACAATAGGTCTAGAAGAATGCAGAGTGAAGTGCTCCAATAATTGTTCTTGTATGGCCTATGCTAATTCAGACATAAATGGTCAAGGTAGCGGTTGTGTCATGTGGTTTGGTGATCTAATTGATATTAGGCAGTTTGATAATGATGGGCAGGATCTACATATTCGAATGCATGCTTCAGAAATAGAGTATTCAGACACTCTATATGATCAAAATAGTGAAGGTAGTGAAGATGATCTTGATCTCCCATCACTTGACCTTTCAACAATAGTCACTGCCACTGAAAACTTCTCAATAAAGAACAAGATTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAAAATTAGTATGTGGACAAGAAATTGCAGTGAAGAGGCTTTCAAGAACCTCTGGACAAGGAATGACAGAGTTCAAGAATGAAGTAAAACTGATAGCAAAACTGCAGCACCGAAATCTCGTTAAGCTTCTTGGTTGTTGCGTTCAGGAGCAGGACAGAATGCTAGTTTACGAATACATGACTAACCGTAGTTTGGATTGGTTGATATTCGATGATACTAAAAGCAAACTGCTAGATTGGCCTAAACGCTTCAACATTATCTGTGGAATTGCTAGAGGTCTTCTTTATCTTCATCAAGATTCTAGATTGAGGATAATTCATAGAGACCTCAAAGCAAGTAACGTTTTGCTTGATGACCAAATGAATCCAAAAATATCAGATTTTGGCATTGCTAGAATTTTTGGAGGAGATCAGACAGAAGGAAACACAAAGAGAGTAGCTGGAACTTATGGTTACATGGCACCAGAATATGCAGCAGATGGTCTTTTTTCTATGAAATCTGATGTTTTCAGTTTTGGTATTTTGCTGCTGGAGATTATAAATGGAAAGAGAAATAGAGGTTTCTATCTTGAAAGCCAGTATCCTAACCTTGTAACTCATGCATGGAGTCTATGGAAAGAGGGTAGAGCTTTAGAAATGGTTGACTCAAGCATAGAGGAGTCGTCTGTTTTATCAGAGGTTTTGCGTTGCATCCATGTGAGTCTCTTATGTGTCCAACAACATGCAGAGGATAGGCCTGTGATGTCTGCTGTGGTTCTAATGTTGGGGAGTGAGAGTGAATTGGCTGAGCCAAAAGAACCTGGTTTCTACATAAAGAATGATCAAGTTGCAGCAACTTCTCTCTCAGGTCGAACTGTCTCAACCAATGAAATAACTATCACATTATTAGAAGCTAGATGA 2325 0.4 MDILSSLIFVACILIPSLKVLIAADTIRLSQSISDGRTLVSQGETFELGFFSPENSKNRYLGIWYKNITQTVVWVANGAINDSSGILTVNSTGNLVLTQHDKVVWYTTRSEKQARNPVAQLLDSGNLVVRDESETNSESYLWQSFDYPSDTLLPGMKLGRNLRTGMEWRMTAWKSRNDPSPGIFYWGLLLYNYPEFYLMKGTEKFMRVGPWNGLHFSGIPDQKPNSVYAYNYISNEDEMYYTFSLKNDAVITKLVMNQTSYMCFRYVWMEDGQYWKLYKSLPKDNCDYYGICGAYGTCTITGSQICQCLSGFSPKSPQAWNSSDWSDGCVRNKPLNCTDKLKDEFVKVKGVKVPDTTNTWVDKTIGLEECRVKCSNNCSCMAYANSDINGQGSGCVMWFGDLIDIRQFDNDGQDLHIRMHASEIEYSDTLYDQNSEGSEDDLDLPSLDLSTIVTATENFSIKNKIGEGGFGPVYKGKLVCGQEIAVKRLSRTSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCVQEQDRMLVYEYMTNRSLDWLIFDDTKSKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDQMNPKISDFGIARIFGGDQTEGNTKRVAGTYGYMAPEYAADGLFSMKSDVFSFGILLLEIINGKRNRGFYLESQYPNLVTHAWSLWKEGRALEMVDSSIEESSVLSEVLRCIHVSLLCVQQHAEDRPVMSAVVLMLGSESELAEPKEPGFYIKNDQVAATSLSGRTVSTNEITITLLEAR* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01497 774 SUPERFAMILY Protein kinase-like (PK-like) 445 730 IPR011009 -
Lapu11g01497 774 CDD B_lectin 30 148 IPR001480 -
Lapu11g01497 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 423 534 - -
Lapu11g01497 774 SMART ntp_6 340 419 IPR003609 -
Lapu11g01497 774 SMART blect_4 30 148 IPR001480 -
Lapu11g01497 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Lapu11g01497 774 ProSiteProfiles Protein kinase domain profile. 459 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01497 774 ProSiteProfiles PAN/Apple domain profile. 337 420 IPR003609 -
Lapu11g01497 774 Gene3D Transferase(Phosphotransferase) domain 1 535 744 - -
Lapu11g01497 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 535 738 - -
Lapu11g01497 774 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 721 - -
Lapu11g01497 774 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Lapu11g01497 774 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Lapu11g01497 774 Pfam D-mannose binding lectin 71 174 IPR001480 -
Lapu11g01497 774 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
Lapu11g01497 774 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 179 IPR036426 -
Lapu11g01497 774 SMART serkin_6 459 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01497 774 PIRSF SRK 1 437 IPR024171 GO:0004674
Lapu11g01497 774 PIRSF SRK 425 774 IPR024171 GO:0004674
Lapu11g01497 774 Pfam Protein tyrosine and serine/threonine kinase 460 728 IPR001245 GO:0004672|GO:0006468
Lapu11g01497 774 Pfam PAN-like domain 339 405 IPR003609 -
Lapu11g01497 774 CDD PAN_AP_plant 334 418 - -
Lapu11g01497 774 CDD STKc_IRAK 465 730 - -
Lapu11g01497 774 Gene3D - 19 145 IPR036426 -
Lapu11g01497 774 Gene3D Phosphorylase Kinase; domain 1 423 534 - -
Lapu11g01497 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01497 Lapu-Chr11 18884955 18888570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01497 447 774 Receptor kinase-like Gene Family AT4G11530 56.677 9.80e-128 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01497 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01497 - - gmx:100775648 1328.15