Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01487 ATGATAGGTGAAGGTGGTTTTGGACGTGTATACAAGGGAATCATCGACGGGCAAGAAATTGCTGTAAAGACTCTATCAAGGAGCTCATGGCAAGGTGTGACAGAGTTCATCAATGAAGTAAACTTGACTGCAAAACTTCAGCATCGGAATCTCGTTAAACTTCTTGGTTGTTGCATTGAAGGGGAAGAAAGAATGCTCATTTATCAGTACATGGAAAATGGCAGCCTAGACTCACTCATTTTTGATGATAAAAGAAGTAAATTGCTGGAGTGGCCTCAACGATTCCACATAATTTGCGGAGTTGCTAGGGGCCTTATGTACCTTCATCAAGATTCTCCACTGAGGATTATCCACAGAGATCTGAAAGCTAGTAACATATTACTCGATAAAACGTTGAATCCGAAAATATCGGATTTTGGTGTGGCAAGATCTTTCGGAGTAGACCAATTTGAAGGAAGCACTAGTAGAGTAGTAGGGACCTGTGGGTACATGGCCCCGGAATATGCTCTCGATGGATTATTTTCTGAAAAATCTGACGTCTTTAGCTTTGGCATTCTGGTGTTGGAGATTGTTTGTGGGAAGAGAAATAAAGGACTTTATCAGACAGATAAGAGTCTTAACCTTGTTGCTCATACATGGACATTATGGAAAGCGGGCAAGGGAATAGATTTGATTGCCTCAGACATAAAGATATCGTCGTGCGTTACATCTGAAGTACTGCGTTGTCTCCATGTCAGTTTTTTGTGTGTGCAACAGAACGCAGATGATAGGCCTACAATGAAGTCTGTGATTCTAATGTTGGAGAGTCACATTGAATTGGCTGAGCCAAAAGAACCTACTTTCATCTCGAGAAATGTATTACCAGAAGAAGATTTACGCTCAAATCCGAAAGACACAAGTTCAACCAACGAAGTGACCATAACCATCTTAGAACCTCGATGA 942 0.4119 MIGEGGFGRVYKGIIDGQEIAVKTLSRSSWQGVTEFINEVNLTAKLQHRNLVKLLGCCIEGEERMLIYQYMENGSLDSLIFDDKRSKLLEWPQRFHIICGVARGLMYLHQDSPLRIIHRDLKASNILLDKTLNPKISDFGVARSFGVDQFEGSTSRVVGTCGYMAPEYALDGLFSEKSDVFSFGILVLEIVCGKRNKGLYQTDKSLNLVAHTWTLWKAGKGIDLIASDIKISSCVTSEVLRCLHVSFLCVQQNADDRPTMKSVILMLESHIELAEPKEPTFISRNVLPEEDLRSNPKDTSSTNEVTITILEPR* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01487 313 FunFam Uncharacterized protein 8 70 - -
Lapu11g01487 313 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 71 275 - -
Lapu11g01487 313 PIRSF ILK 1 278 - -
Lapu11g01487 313 Pfam Protein tyrosine and serine/threonine kinase 2 264 IPR001245 GO:0004672|GO:0006468
Lapu11g01487 313 Pfam Domain of unknown function (DUF3403) 272 313 IPR021820 GO:0004674
Lapu11g01487 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Lapu11g01487 313 Gene3D Phosphorylase Kinase; domain 1 2 71 - -
Lapu11g01487 313 SMART serkin_6 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01487 313 ProSiteProfiles Protein kinase domain profile. 1 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01487 313 ProSitePatterns Protein kinases ATP-binding region signature. 2 23 IPR017441 GO:0005524
Lapu11g01487 313 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 313 - -
Lapu11g01487 313 SUPERFAMILY Protein kinase-like (PK-like) 1 268 IPR011009 -
Lapu11g01487 313 Gene3D Transferase(Phosphotransferase) domain 1 72 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01487 Lapu-Chr11 18370985 18379465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01487 2 313 Receptor kinase-like Gene Family AT4G23150 52.351 2.80e-113 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01487 PK_Tyr_Ser-Thr 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01487 - - vra:106754325 554.673