Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01485 ATGGCTCCAGAGTATGCCGTTGATGGACTATTTTCAATCAAATCTGATGTTTTCAGCTTTGGTATTTTGTTGTTGGAAATTGTATGTGGGAGCAAAAATAGAGCTCTGTCTCATGGAAACCAGACTCTTAACCTTGTTGGCTATGCATGGAAACTTTGGAAAGCGCAAAAGGCCTTATATTTGATAGATTCAAATGTGAAAGACTCGTGTGTTATGACAGAAGCACTAAGATGCATCCATGTCAGTCTCTTGTGCGTGCAACAGTACCCGGAAGATAGGCCAACCATGACATCCATAATTCAAATGTTAGGGAGTGAGACGGAACTGGTTGAGCCAAAGGAGCCTGGTTTCTTTCCAAAGAGAATTTCGGATGATGAAAACCTTAACAATGTGTCTATAAATGGAGAATTAAGCATTACCTCTTTAAATGGTCGGTAA 438 0.4018 MAPEYAVDGLFSIKSDVFSFGILLLEIVCGSKNRALSHGNQTLNLVGYAWKLWKAQKALYLIDSNVKDSCVMTEALRCIHVSLLCVQQYPEDRPTMTSIIQMLGSETELVEPKEPGFFPKRISDDENLNNVSINGELSITSLNGR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01485 145 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Lapu11g01485 145 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Lapu11g01485 145 SUPERFAMILY Protein kinase-like (PK-like) 1 123 IPR011009 -
Lapu11g01485 145 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01485 Lapu-Chr11 18327442 18327960 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01485 1 120 Receptor kinase-like Gene Family AT4G23300 51.613 1.01e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01485 PK_Tyr_Ser-Thr 2.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01485 - - gmx:100812007 244.588