Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01484 ATGTTTGTTTCCACTCTCAAAATTTCCGCAGCTATTCTCAGTGTGTCACAGTCAATCATTGACGGCGAGACATTAGTGTCCAACAGTGGAGAGTTTCAGCTGGGTTTCTTCAGCCCAGGCATTTTAGCATTCAGCAAGACAGGGAATCTTGAGGTCAGACAAAACGACACAGTTGTCTGGTCTGCAACCTACCAAAAACAAGCACGGAATCCAGTTGCAGTGCTCTTGGATAGTGGCAATCTTGTGGGAAAATTATTGGACGGGCAAGAAATTGCTGTCAAGAGACTTTCAAGCAGTTCTGGACAAGGAATAACTGAGTTCATAACAGAAGTGAAACTGATTGCAAAGCTTCAACACCGAAATCTGGTAAAGCTGCTTGGCTGTTGCATCCGAGGGGAGGAAAAAATACTAGTATATGAATACATGGTTAATGGAAGTTTAGACTCCTTCATTTTTGATAAACTAAAAGGCAAATTTCTTGATTGGCCTCTGCGCTTCCAAATAATATTTGGAGTTGCTAGGGGGCTTTTGTATCTTCATCAAGATTCCCGATTAAGGATAATACACAGAGATCTCAAGGCAAGTAATGTTTTACTTGATGAAAAGTTAAATCCAAAAATTTCAGACTTTGAAATGGCTAGAGCTTTTGGAGGAGACCAAACTGAAGGAAACACAAACAGAGTAGTTGGGACATAG 696 0.408 MFVSTLKISAAILSVSQSIIDGETLVSNSGEFQLGFFSPGILAFSKTGNLEVRQNDTVVWSATYQKQARNPVAVLLDSGNLVGKLLDGQEIAVKRLSSSSGQGITEFITEVKLIAKLQHRNLVKLLGCCIRGEEKILVYEYMVNGSLDSFIFDKLKGKFLDWPLRFQIIFGVARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFEMARAFGGDQTEGNTNRVVGT* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01484 231 Pfam Protein tyrosine and serine/threonine kinase 88 220 IPR001245 GO:0004672|GO:0006468
Lapu11g01484 231 SUPERFAMILY alpha-D-mannose-specific plant lectins 38 82 IPR036426 -
Lapu11g01484 231 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 81 231 - -
Lapu11g01484 231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Lapu11g01484 231 FunFam Uncharacterized protein 76 141 - -
Lapu11g01484 231 Gene3D Transferase(Phosphotransferase) domain 1 143 231 - -
Lapu11g01484 231 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 142 231 - -
Lapu11g01484 231 SUPERFAMILY Protein kinase-like (PK-like) 83 231 IPR011009 -
Lapu11g01484 231 Gene3D - 11 81 IPR036426 -
Lapu11g01484 231 Gene3D Phosphorylase Kinase; domain 1 82 142 - -
Lapu11g01484 231 SMART serkin_6 76 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01484 231 ProSiteProfiles Protein kinase domain profile. 26 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01484 Lapu-Chr11 18322825 18327346 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01484 83 231 Receptor kinase-like Gene Family AT4G23230 65.772 9.70e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01484 PK_Tyr_Ser-Thr 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01484 - - gmx:100807748 276.559